Protein

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Genbank accession
QZI81804.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MAVVGVPGWIGSSAANETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTVGANHNFNGQWFRDRCFEAGGAPIVFNIVGDIVSYSKDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGGSNSPGSAGGHCIQNDIGGRLRINNGGAIAGGGGGGGGGYYSPFSRMRLTFGGGGGRPFGAPGGSILFLHLAQDP
Physico‐chemical
properties
protein length:195 AA
molecular weight: 20270,47650 Da
isoelectric point:8,95648
aromaticity:0,10769
hydropathy:-0,14410

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–140
DC_2135
QZI81804.1
1 195
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-140 | RBD 141-185 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI81804.1
1 195
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,2367
Central domain 60 184 126 0,9058
C-terminal 185 195 10 0,8225
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-184
C-terminal
185-195

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-G3F7
[NCBI] 		2865812 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI81804.1 [NCBI]
Genbank nucleotide accession
MZ234035.1 [NCBI]
CDS location
range 61520 -> 62107
strand -
CDS
ATGGCAGTAGTTGGTGTTCCTGGTTGGATTGGAAGTTCAGCCGCAAATGAAACAGGACAGCGCTGGATGAGTCAAGCGGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCACGAGAAATTATTCATACTGTAGGAGCAAACCACAATTTTAATGGTCAGTGGTTCCGTGATAGATGCTTTGAAGCTGGCGGTGCACCTATTGTATTCAATATTGTTGGTGATATCGTTTCTTATTCTAAAGATGTTCCTTTATTCTTCATGTACGGAGATACACCAAATGAATATGTTCAGTTAAATATACATGGCGTAACGATGTATGGTCGTGGAGGTAATGGCGGTAGCAATAGTCCTGGCTCAGCTGGAGGTCATTGTATTCAAAACGATATTGGTGGGAGACTAAGAATTAATAATGGCGGAGCTATTGCAGGCGGTGGCGGCGGTGGCGGCGGCGGATATTATTCTCCTTTTTCACGAATGAGATTGACCTTTGGTGGTGGTGGCGGTCGTCCTTTTGGTGCGCCAGGAGGATCTATTCTATTTCTGCACCTGGCTCAGGATCCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4d7e5fe4de2311690bea385fbde92db49a40f8bc65b54b739938dc1b5d8a1a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7590
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank