Protein

View in Explore
Genbank accession
QLF80772.1 [GenBank]
Protein name
baseplate wedge protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSNNTYQHVSNESKYVKFDPTGSNFPDTVTTVQSALSKISNIGVNGIPDATMEVKGIAMIASEQEVLDGTNNSKIVTPATLATRLLYPNATETKYGLTRYSTNEETLEGSDNNSSITPQKLKYHTDDVFQNRYSSESSNGVIKISSTPAALAGVDDTTAMTPLKTQKLAIKLISQIAPSEDTASESVRGVVQLSTVAQTRQGTLREGYAISPYTFMNSVATQEYKGVIRLGTQSEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGIAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIMMFAGDSAPPGWIMCHGGTVSGAQFPDYRNTVGTRFGGDWNNPGIPDMRGLFVRGAGTGSHILNQRGQDGYGKDRLGVGCDGMHVGGVQAQQMSYHKHAGAWGENGNNRGYAPFGASNGSGYLGNGRSADWDNHLFFTNDGFEMGGARDSFGTLNREGLIGYETRPWNISLNYIIKVHY
Physico‐chemical
properties
protein length:518 AA
molecular weight: 55333,59790 Da
isoelectric point:5,96067
aromaticity:0,07722
hydropathy:-0,45502

Domains

Domains [InterPro]
DC_0176
STR
1–439
DC_0176
IPR015173
STR
246–324
IPR015173 IPR037053 IPR044916
SSF69349
STR
246–346
SSF69349 IPR027448
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 SSF88874
IPR011083
ATT
337–392
IPR011083
QLF80772.1
1 518
Architecture
STR
ATT
STR
STR 1-323 | ATT 324-392 | STR 393-516 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_SP1
[NCBI] 		2750852 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF80772.1 [NCBI]
Genbank nucleotide accession
MT682709 [NCBI]
CDS location
range 78690 -> 80246
strand -
CDS
ATGAGTAACAATACATATCAGCACGTATCAAATGAATCAAAATATGTTAAATTCGATCCTACTGGATCGAATTTTCCTGACACTGTCACGACAGTGCAGTCTGCATTATCAAAAATAAGTAATATCGGCGTAAATGGTATTCCTGATGCAACTATGGAAGTTAAAGGAATAGCAATGATTGCGTCAGAGCAAGAGGTTTTAGATGGAACTAATAATTCTAAAATCGTTACACCAGCTACATTAGCAACAAGACTATTGTATCCAAATGCTACTGAAACTAAGTATGGTTTAACGCGCTATTCAACAAATGAAGAAACATTAGAAGGCTCAGATAATAATTCATCAATAACGCCGCAAAAACTGAAATACCATACTGACGATGTGTTCCAAAATAGATATTCGTCTGAGTCATCAAACGGGGTTATTAAAATATCATCTACACCTGCAGCTTTAGCTGGAGTTGATGATACTACGGCGATGACTCCATTAAAAACGCAAAAACTTGCAATAAAATTAATTTCACAAATAGCTCCTTCCGAAGATACTGCATCAGAATCTGTGAGAGGTGTAGTTCAATTATCTACTGTTGCGCAAACTCGTCAAGGAACTCTCCGCGAAGGATATGCAATTTCTCCGTATACCTTTATGAATTCTGTTGCAACACAAGAATATAAGGGTGTTATACGTTTAGGAACACAATCGGAAATTAACAGTAATTTAGGAGATGTTGCAGTAACAGGTGAAACACTAAATGGTCGAGGAGCTACTGGTTCTATGCGTGGAGTAGTTAAATTAACGACGCAAGCCGGTATTGCCCCTGAAGGTGATAGCTCTGGTGCATTAGCATGGAACGCAGATGTAATTAATACTCGTGGTGGACAAACTATTAATGGTTCTTTAAATTTAGACCATCTTACAGCAAACGGAATTTGGTCACGCGGCGGAATGTGGAAAAATGGCGATCAACCTGTTGCCACTGAAAGATATGCGTCCGAAAGGGTTCCAGTCGGAACTATTATGATGTTTGCGGGTGATTCAGCACCTCCGGGTTGGATTATGTGCCACGGTGGAACCGTCTCAGGTGCCCAATTTCCTGATTATAGAAACACAGTTGGAACAAGATTTGGTGGTGATTGGAATAATCCTGGTATTCCTGATATGCGAGGTCTTTTTGTTAGAGGAGCTGGCACAGGCAGTCATATTTTAAATCAACGCGGACAAGATGGTTATGGGAAGGATAGACTTGGTGTAGGATGTGACGGAATGCATGTTGGCGGTGTTCAGGCACAACAAATGTCATACCATAAACATGCTGGTGCCTGGGGGGAAAATGGAAATAACAGAGGTTATGCACCGTTTGGCGCATCTAATGGCAGTGGATATTTAGGCAATGGTAGAAGCGCCGACTGGGACAACCATTTGTTCTTTACTAACGACGGATTTGAAATGGGTGGTGCTCGTGATTCGTTTGGTACGTTAAACCGTGAAGGATTAATTGGTTATGAAACTAGACCATGGAATATATCATTAAACTATATTATTAAAGTTCATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d02b069a3961a66923f2cd9a67c5d5dad55714632a3017e949fa6d8e9bba3a98
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6676
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of eight phages infecting swine Enterotoxigenic Escherichia coli Ferreira,A., Oliveira,H., Silva,D., Almeida,C., Burgan,J., Azered,J. and Oliveira,A. 2020-09-03 — GenBank