Protein

Genbank accession
YP_024912.1 [GenBank]
Protein name
pectin lyase activity
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MPKQGSYPMGVRTLANGDTLTGVVTSDTADVPVETLRAFNETTGNLNPANVSAPDLLDGTETWSIRKAGTWARASLSAIASFCAGVALVWQAAGTGAVLRTLVKKFGDYPVTPQDYGAAGNGTTPDDTAIATFWTAVKLVGKGWIPKATYKCNNPIVWDMTGLGDTGVVVEGGGQKAAIFDLSTVTSAPAFLITKTDGAAFYSEFRNFGIRANVAGAALQLGRTDFSDPQNAFSFENMWVGNNNPSTSAIGVQVNYVLGSQFKNIVPACNHGGDSWQINAASFCKWEGGSGTWAQNGIHLTAGGAGTGTIAGNVFEAMDFEENTAASVTIDTNNAHNNTFIGSTFVYNPNSYTPWATSTVYALNAVVISNRAVYKATTGGTSASSGSGPSGTGASISDGTVVWAYQNAGTSVGVNASAGSENFFISPNTLCYPSGTPSYSNFFSNSAGCGLMGKFGMTVGMEIGSPSFYATLSASQNVTAGTWTKGQYDTVGAQRGIGAYDATTKYRFTAPFAGWYRFKHCAIINATNASNAVAYAALYKNGSNLRAAGVSVAAGVNFVAAQVDAMLYLNGGDYIEAWSSIPASSGTPAINGGASNSWFEGQYIG
Physico‐chemical
properties
protein length:605 AA
molecular weight: 62680,68520 Da
isoelectric point:5,33533
aromaticity:0,11240
hydropathy:-0,03174

Domains

Domains [InterPro]
IPR008983
465–604
IPR008983
IPR008983
466–603
IPR008983
YP_024912.1
1 605
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage BcepB1A
[NCBI] 		279530 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia cenocepacia
[NCBI] 		95486 Bacteria > Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_024912.1 [NCBI]
Genbank nucleotide accession
NC_005886 [NCBI]
CDS location
range 2492 -> 4309
strand -
CDS
ATGCCGAAGCAAGGTAGTTACCCGATGGGGGTTCGCACGTTGGCAAACGGTGACACGCTCACTGGCGTGGTTACTAGCGATACCGCAGACGTACCCGTCGAAACGCTGCGTGCGTTCAACGAAACGACAGGTAATTTGAACCCTGCCAACGTAAGCGCGCCCGATTTGCTCGACGGGACTGAAACGTGGTCGATTCGTAAAGCCGGCACGTGGGCGCGTGCGTCACTGTCGGCTATCGCATCATTCTGCGCAGGCGTTGCATTGGTATGGCAAGCTGCGGGAACGGGCGCAGTATTGCGCACTCTGGTTAAGAAATTTGGAGATTACCCTGTCACTCCACAAGACTATGGGGCTGCGGGCAATGGTACAACGCCCGACGATACCGCGATCGCTACGTTTTGGACTGCTGTAAAGCTCGTAGGTAAAGGCTGGATACCAAAGGCGACCTATAAATGCAACAATCCTATTGTGTGGGATATGACCGGTCTTGGGGATACTGGCGTCGTTGTGGAAGGCGGGGGCCAAAAGGCAGCAATATTTGACCTATCGACCGTAACAAGCGCGCCAGCGTTTCTTATCACCAAAACTGACGGTGCGGCATTTTATAGTGAATTCCGAAACTTTGGAATTCGGGCGAATGTTGCGGGTGCCGCACTGCAATTGGGGCGAACCGATTTCAGTGATCCGCAAAATGCGTTTTCATTTGAAAACATGTGGGTCGGCAATAACAATCCATCCACATCAGCAATTGGTGTGCAAGTGAATTATGTACTTGGTAGCCAATTTAAAAATATCGTACCCGCGTGTAATCACGGTGGCGATAGCTGGCAAATTAACGCTGCATCATTTTGTAAATGGGAAGGTGGTTCTGGCACCTGGGCACAAAACGGTATTCATTTAACGGCAGGCGGTGCAGGAACCGGCACGATTGCCGGCAACGTATTTGAGGCGATGGACTTCGAAGAGAATACGGCCGCGTCCGTTACCATCGATACGAATAATGCTCACAATAATACTTTTATTGGTAGCACGTTTGTATATAACCCTAATAGTTATACCCCGTGGGCGACGTCTACTGTATATGCCCTGAATGCTGTCGTGATCAGCAACCGCGCAGTTTACAAAGCTACAACAGGTGGCACGTCGGCTTCATCGGGAAGCGGACCTAGTGGAACGGGTGCGTCCATTTCGGACGGTACTGTTGTGTGGGCTTATCAAAACGCAGGAACAAGCGTTGGTGTGAATGCTTCAGCAGGCTCAGAAAACTTTTTCATTTCCCCCAACACTTTGTGTTATCCGTCAGGCACGCCAAGTTATTCAAATTTCTTTAGTAATTCTGCTGGCTGCGGCTTGATGGGTAAATTTGGAATGACTGTAGGAATGGAAATCGGAAGTCCGTCTTTCTATGCCACTCTTTCGGCAAGTCAAAACGTTACTGCCGGCACATGGACCAAAGGGCAATATGATACGGTTGGCGCTCAACGTGGCATTGGTGCTTACGACGCGACTACTAAATATCGATTTACTGCACCATTTGCAGGATGGTATCGATTCAAGCATTGCGCAATTATCAACGCCACTAATGCGTCAAACGCAGTAGCATACGCAGCACTCTATAAAAACGGTTCGAATCTTCGCGCGGCCGGCGTGTCAGTTGCAGCCGGTGTAAATTTTGTTGCTGCTCAGGTTGATGCGATGCTGTACTTGAACGGCGGCGACTATATTGAGGCATGGAGTAGTATTCCGGCAAGTAGCGGAACCCCTGCAATAAATGGTGGTGCGTCAAATAGCTGGTTTGAAGGTCAATACATTGGTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8b7b7ff9bfda3b812515ea109930bf26be538486fba22c2842d233a0096dfa26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8371
Evidence 0,8371
Download PDB

Literature

No literature entries available.