Protein

View in Explore
Genbank accession
YP_004323175.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MSEIKVDKVKGRQAPASGPEVTFDSSGNISFAGNISSTGDVTADDVTVNSLLLIPRYATSALPGSATTGSIAWDTDDEVIKVWDGTEWRNVGKGAGISGSGGSVSTAGGYTIHTFTSGGALTIDGEGTVDVLLVGGGAGGGTRNAGPNSGGTDGGSGGGAGGWVQVAGMPLTSGSYPVSVGGGGNGYQSGQNPGQNGSPSTFNGLVAYGGGYGASGPGNRPGGPGGSGGGAGGGGGSPGQGGSAQQPGAPGQSGSNGHGNPGGPNPNQACYSGSGGGGAGGSGSTGGNGRQAPGGNGRSSVYSGSNTTYAGGGGGGGGHPGSCRGGNGGSGGGGHGGVAPNRPNNGYGGAGSPGQGGGGGGGAGNPWPNGSGGNGGSGVVIVRYQTP
Physico‐chemical
properties
protein length:387 AA
molecular weight: 35343,86800 Da
isoelectric point:6,04303
aromaticity:0,05168
hydropathy:-0,48450

Domains

Domains [InterPro]
DC_0634
STR
2–295
DC_0634
IPR049304
STR
123–385
IPR049304
PR01228
Unmapped
135–146
PR01228 PR01228 PR01228 PR01228
YP_004323175.1
1 387
Architecture
STR
STR 2-385 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-RSM4
[NCBI] 		444862 Uroviricota > Caudoviricetes > Pantevenvirales > Thaumasvirus > Thaumasvirus stim4
Host Prochlorococcus marinus str. MIT 9303
[NCBI] 		59922 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323175.1 [NCBI]
Genbank nucleotide accession
NC_015283 [NCBI]
CDS location
range 33541 -> 34704
strand +
CDS
ATGTCTGAAATTAAAGTAGATAAAGTTAAAGGTAGACAGGCACCCGCAAGTGGTCCTGAAGTCACCTTTGATTCGTCTGGAAACATATCTTTTGCAGGTAATATTTCATCTACTGGTGATGTCACTGCTGATGATGTTACAGTCAACTCCTTACTTCTTATTCCCAGATATGCAACGAGTGCTTTACCTGGTAGTGCAACTACAGGAAGTATTGCATGGGATACAGATGATGAAGTAATTAAAGTTTGGGACGGAACGGAATGGAGAAATGTTGGAAAGGGAGCAGGAATATCAGGTAGTGGTGGATCAGTTTCAACTGCAGGTGGATATACTATCCATACATTTACAAGTGGTGGAGCATTAACTATTGATGGAGAAGGAACTGTTGATGTTCTTTTAGTTGGTGGTGGTGCAGGTGGTGGAACTCGTAATGCTGGTCCTAACTCAGGAGGAACTGACGGAGGTTCTGGTGGAGGAGCAGGTGGTTGGGTTCAAGTAGCAGGTATGCCTCTCACATCTGGAAGTTATCCTGTTAGTGTTGGTGGCGGTGGTAATGGTTATCAGTCTGGACAAAATCCTGGTCAAAATGGTTCGCCCTCTACATTCAATGGTCTTGTAGCATACGGTGGAGGATACGGTGCCTCAGGTCCTGGTAATAGACCAGGTGGTCCTGGTGGATCTGGCGGAGGAGCAGGAGGAGGTGGAGGTTCACCTGGTCAAGGTGGTTCTGCACAACAACCTGGTGCACCTGGTCAGTCTGGTTCTAATGGACATGGAAATCCTGGTGGTCCTAATCCTAACCAAGCATGTTACTCTGGTTCTGGTGGAGGAGGAGCAGGAGGATCTGGTTCGACTGGTGGAAATGGTCGTCAGGCACCTGGTGGAAATGGAAGATCAAGTGTATATTCTGGAAGTAATACAACCTACGCAGGTGGCGGAGGAGGTGGCGGTGGTCATCCAGGTTCCTGTCGTGGAGGTAACGGAGGTTCTGGTGGCGGTGGTCACGGTGGTGTTGCTCCTAACCGTCCGAATAATGGTTATGGTGGTGCAGGTTCACCTGGTCAAGGTGGCGGTGGCGGAGGAGGTGCAGGAAATCCTTGGCCAAATGGGTCAGGTGGTAATGGTGGTAGTGGTGTTGTTATTGTTAGATACCAGACACCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
532034db43cbef59d50c873ab8036c24e79c39e2bb7512468c470fcc6c90b1a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8017
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 9303-10a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank