Protein

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Genbank accession
XRA40243.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MALQKVNPSLIHGGTAAVGDVLGKVTQTDVGFMKPGEKPGSDTSISLEFDSTTGTLTFIGSNGEQATTSGLPTADQMKLGRQGPQGQPGRPGTPGNPGRNGLDGDPGCPGPRGAPGRPGPTGNTGAIGPTGETGSPGPTGPTGPTGVPGRDSQINEYVVSQLVDPNTNEPIVGAYIGSERDPNTGYTRNFGRIRFPASDSTISIVFNSPFINRCVALNITFLNAATNQARTFRIYDLDANAVNENLLLGGFILKSDGLNSMPWDFFYSAEGD
Physico‐chemical
properties
protein length:272 AA
molecular weight: 28111,74370 Da
isoelectric point:4,85100
aromaticity:0,06618
hydropathy:-0,43125

Domains

Domains [InterPro]
DC_0452
ATT
1–45
DC_0452 PTHR24637 DC_0380
IPR008160
STR
98–151
IPR008160
XRA40243.1
1 272
Architecture
ATT
STR
RBD
ATT 1-45 | STR 98-151 | RBD 152-272
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Sen-NF
[NCBI] 		3411927 No lineage information
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA40243.1 [NCBI]
Genbank nucleotide accession
PV359490.1 [NCBI]
CDS location
range 101659 -> 102477
strand +
CDS
ATGGCACTACAAAAGGTCAACCCGTCATTGATCCACGGTGGAACTGCTGCTGTAGGAGATGTGCTGGGGAAAGTAACTCAGACTGATGTTGGATTCATGAAACCGGGTGAAAAGCCCGGATCTGACACGTCTATCTCCCTTGAATTTGATTCAACGACAGGGACGCTGACATTCATCGGATCTAATGGGGAACAGGCTACAACGTCTGGACTCCCTACAGCGGACCAAATGAAGTTAGGAAGACAGGGTCCTCAAGGACAACCAGGCAGACCGGGAACTCCCGGCAACCCTGGGCGTAACGGACTTGATGGAGACCCAGGATGTCCGGGCCCACGCGGCGCTCCTGGGCGTCCCGGCCCGACAGGGAACACAGGAGCTATCGGCCCAACAGGGGAAACAGGATCTCCTGGCCCGACAGGCCCAACTGGCCCTACAGGAGTACCGGGACGTGACTCTCAGATTAATGAGTATGTCGTATCTCAGTTAGTCGATCCAAATACGAACGAACCCATCGTCGGAGCGTATATAGGATCGGAGCGTGATCCAAACACAGGATATACGCGCAACTTTGGGCGTATCCGTTTCCCTGCATCCGATAGTACGATAAGCATTGTGTTCAACAGTCCGTTCATCAACCGTTGTGTTGCACTCAACATCACTTTCTTAAACGCAGCGACGAACCAAGCGCGTACGTTCCGGATATATGATCTGGATGCTAACGCAGTCAATGAAAACTTGCTGCTTGGTGGATTCATTCTTAAGTCGGATGGATTGAACAGCATGCCATGGGATTTCTTCTACTCTGCCGAGGGGGATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c890f34bc7e045934f137cd3955644ab85e6b9c39bdaf78814f3e06344e67869
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50