Protein

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Genbank accession
WVX87467.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTLGTNIFKHVSDDASTVNVVTETTVFSSDNLQGCLEELDPHVLNPIPEPDPATDTTSGVVRFATPAETLASSLDNVAITPWDLNYWFENLGQATTAQYGTIRIATDAQVLEGTDETLAITPKSLNWYATNKPATETEVGFARRATQAQAVAGSDNSTIMTPLRVKQCIDAWAVGSDADATTTEKGLIRIATTTEVNDITKDNLAVTPYNLNARIPTATVRAGFKLPDAGVANARTSNEHVLTPGNLSLFAANSVRAGVAKVLNTLTSSDTTSALSAAMGKKLQDEKIGITGGRITGALAINTIETLSGVSTMAGGYFTSRAMLNMYPVGSIYISVSPTNPASVFGGSWSAFGEGRVLIGAGTTQDDRGEYKTFTNGQTGGAYNHLLTEAEMPEHKHAGWGEYQDTGVYAQGLGFGIAKQYGRNNVGQKRHDFDNWLYYSSPVGGSQAHNNMQPYIVVYMWRRTA
Physico‐chemical
properties
protein length:465 AA
molecular weight: 49659,67320 Da
isoelectric point:5,16907
aromaticity:0,07957
hydropathy:-0,24774

Domains

Domains [InterPro]
DC_0176
STR
1–445
DC_0176
IPR054500
STR
262–287
IPR054500 SSF88874
IPR053827
ATT
326–464
IPR053827
WVX87467.1
1 465
Architecture
STR
ATT
STR 1-325 | ATT 326-464 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage EniLVp02
[NCBI] 		3116828 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX87467.1 [NCBI]
Genbank nucleotide accession
PP209424 [NCBI]
CDS location
range 90208 -> 91605
strand -
CDS
ATGACATTAGGCACAAACATTTTCAAACACGTTTCGGACGACGCCAGTACAGTCAATGTTGTAACCGAAACCACGGTATTCAGCAGCGACAACTTGCAGGGGTGTCTCGAAGAACTGGATCCACATGTTCTAAATCCAATACCTGAGCCAGATCCGGCAACGGATACCACGTCGGGGGTGGTTCGATTTGCAACCCCGGCTGAAACACTGGCTAGTTCACTGGACAACGTCGCGATCACCCCATGGGATCTAAACTACTGGTTCGAGAACTTGGGTCAAGCGACGACTGCCCAATATGGTACGATCCGCATTGCAACCGACGCTCAAGTATTGGAAGGGACTGACGAGACGCTTGCCATTACCCCCAAATCCCTGAACTGGTATGCAACAAATAAGCCAGCAACGGAAACAGAAGTCGGATTTGCTCGCCGGGCAACTCAGGCACAAGCCGTCGCTGGTTCGGACAACAGTACGATCATGACCCCGCTGAGGGTTAAGCAATGTATTGACGCTTGGGCGGTTGGTTCCGATGCAGACGCGACGACAACCGAGAAGGGGCTTATCCGGATTGCGACGACAACCGAGGTCAACGATATCACCAAGGATAACTTGGCGGTGACCCCGTACAATCTGAACGCACGGATCCCGACGGCGACTGTTCGGGCTGGTTTTAAACTTCCTGATGCCGGAGTGGCGAACGCTCGAACCAGTAATGAACACGTCCTGACACCGGGCAACCTGTCGCTGTTTGCTGCAAACTCAGTTCGGGCTGGGGTCGCCAAGGTTCTGAATACCTTGACCAGTTCGGATACCACGTCGGCACTGTCTGCTGCCATGGGTAAGAAATTACAGGATGAAAAGATTGGTATCACCGGTGGGCGCATTACCGGGGCTTTGGCAATAAATACTATAGAGACATTATCCGGTGTATCAACAATGGCAGGCGGCTACTTTACCAGTCGTGCAATGTTGAATATGTATCCGGTGGGGTCGATTTATATTTCAGTCAGTCCGACTAACCCGGCGTCGGTATTCGGTGGTTCATGGTCAGCGTTCGGGGAGGGTCGCGTACTAATCGGTGCGGGTACTACTCAGGATGACCGAGGTGAATATAAAACATTTACCAATGGACAAACCGGCGGTGCATACAATCACCTACTAACCGAGGCAGAAATGCCAGAACACAAACATGCTGGTTGGGGTGAATATCAAGATACTGGGGTTTATGCACAAGGGCTTGGTTTTGGAATTGCGAAACAGTACGGACGAAACAACGTAGGTCAGAAAAGACACGACTTCGATAACTGGTTGTATTACTCAAGCCCGGTAGGTGGGTCACAGGCTCACAATAACATGCAGCCCTATATCGTGGTGTATATGTGGCGACGTACAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
15fba9a509942ca7982fbd14635236dcf3783ab5dd436e43375024723a9b7e76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7526
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50