Protein

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Genbank accession
AFE86209.1 [GenBank]
Protein name
putative tail appendage
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKQYQAVETNSFIKGFVTEANALTFPPNASIDEQNFLLNKDGSRKRRLGMVQEEGGTLIPSLNESINSYTITTYEWEAPGGFEALSFLAMQDGPDLLIFDKTQAQVSNSLLKTYSNLLPTENSVSFANVNGILVVATGTRFLTSIEYTGSEFKDDTFEIKIRDLFGVDDGAMSGSGLAERPGSLSQEHLYNLKNQTWAVPRKAGNSESLKDPVKQFRDKAGVYPSNADSVNSALYADVNDGDDRISKRFFAKDLEANPVGSMEAPRGRFIISVLERSSSRDEEMDKLYSDYTPQEYEFTGAPLDRTTGGSTVVAEFSGRCWYSGFIGESQGGDRRSPRLSSYVFYSRLIDSPAQLGECHSSQDPTTPDQFELADTDGGFLRIDGANNILHMEPLGSSLIVMAANGVWQVSGGSDYGFTANNYKVSKVSDRGVVGKNTIIPTGDSIVYWSESGVHLINYNELGDLNSSNISLQTIQTYFESIPELDKKNAQGKFDSFQQTCRWVFGGDTELLLDLNLQAFSRNKIYGDKKVVALFEVPPFSVSQEATFVKAGSDDVVAGADKVVATLPQIVAGFRELKYVYLEDVGGTPHFSFSSYSGLDFKDWGADDAFAYMYTGYISGGDFQRYKQVPYLTTHMAQTETEVTQDFELLNQSGCKARVAWEWSNNVNSGRWSRQFQIYRFKRFYVPDGGSGDFDNGFSVVTTKNKLRGKGRVLSLHFETEPDKDCHILGWSFFLGVSGNV
Physico‐chemical
properties
protein length:741 AA
molecular weight: 82043,08150 Da
isoelectric point:4,84953
aromaticity:0,11741
hydropathy:-0,40013

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFE86209.1
1 741
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,9254
Central domain 172 386 216 0,4927
C-terminal 387 741 354 0,2644
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-386
C-terminal
387-741

Taxonomy

  Name Taxonomy ID Lineage
Phage Salinivibrio phage CW02
[NCBI] 		1161935 Uroviricota > Caudoviricetes > Zobellviridae > Salinovirus utanense >
Host Salinivibrio costicola
[NCBI] 		51367 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Salinivibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFE86209.1 [NCBI]
Genbank nucleotide accession
JQ446452 [NCBI]
CDS location
range 28118 -> 30343
strand -
CDS
GTGACGAAACAGTATCAAGCGGTTGAGACGAATAGTTTTATCAAGGGCTTTGTCACAGAGGCAAATGCCCTAACTTTTCCTCCTAACGCCTCCATTGACGAGCAGAACTTCCTCCTAAATAAGGACGGGTCTCGTAAGCGTCGCCTAGGTATGGTGCAGGAGGAAGGGGGCACCCTAATCCCCTCCCTCAATGAGTCAATTAACTCTTACACAATCACCACCTATGAGTGGGAGGCACCTGGAGGTTTTGAGGCGCTCTCATTTCTTGCTATGCAGGACGGCCCGGACCTCCTCATCTTCGACAAGACACAGGCGCAAGTATCCAACTCGCTGTTAAAAACATATAGCAATTTGTTGCCAACAGAAAATAGCGTCTCCTTCGCAAACGTTAACGGAATCTTGGTAGTGGCAACAGGGACTCGTTTCCTAACCAGCATTGAGTACACGGGTTCTGAGTTTAAAGACGACACGTTTGAGATTAAGATTCGGGATTTGTTTGGCGTGGATGACGGGGCTATGTCCGGTTCGGGGTTGGCAGAGAGGCCAGGTAGTTTATCTCAGGAGCATCTCTACAACCTTAAGAACCAGACATGGGCTGTGCCCCGTAAGGCAGGTAACAGCGAGTCCCTAAAAGACCCTGTGAAGCAGTTTAGAGACAAGGCAGGGGTCTACCCCTCTAACGCAGACTCAGTTAACTCTGCCCTGTACGCAGACGTCAATGATGGAGATGACCGCATCTCTAAGAGGTTCTTCGCAAAAGACCTAGAGGCCAACCCTGTAGGTTCTATGGAAGCCCCACGAGGGCGTTTCATCATCTCTGTATTGGAACGTTCAAGCTCCCGTGACGAGGAGATGGACAAGCTTTACTCAGACTACACCCCACAGGAGTATGAGTTCACAGGGGCCCCTCTAGACAGGACTACTGGAGGTTCCACTGTTGTCGCAGAGTTCTCTGGTCGTTGTTGGTACTCTGGGTTTATTGGAGAGAGCCAAGGGGGAGATAGACGTTCTCCTAGGTTAAGTTCTTACGTATTCTATAGCAGGCTAATTGACAGCCCTGCTCAGCTAGGTGAGTGCCACTCCTCTCAAGACCCAACAACACCTGACCAGTTTGAGTTGGCTGATACAGATGGGGGTTTCCTCCGTATAGATGGGGCCAATAACATCCTCCACATGGAGCCTCTTGGCTCTTCACTGATTGTTATGGCGGCTAATGGCGTCTGGCAAGTGTCAGGGGGCTCTGACTACGGGTTCACCGCCAACAATTACAAGGTGTCTAAAGTCTCTGACCGTGGTGTGGTTGGCAAGAATACTATCATACCTACCGGCGATTCTATTGTCTATTGGTCTGAGAGTGGTGTTCATTTAATCAACTACAATGAGCTTGGCGACCTAAACTCCTCTAACATCTCACTCCAAACAATTCAAACATATTTTGAGTCTATCCCTGAGTTAGATAAGAAAAACGCTCAAGGTAAGTTTGATTCTTTCCAGCAGACATGTCGTTGGGTGTTTGGAGGTGATACAGAGTTGTTGTTGGACCTAAACTTACAAGCCTTCTCCCGCAACAAGATATACGGGGACAAGAAGGTGGTGGCACTGTTTGAGGTTCCTCCTTTCTCTGTCTCACAAGAAGCCACCTTTGTTAAGGCAGGCTCTGATGATGTTGTAGCAGGGGCTGACAAGGTGGTGGCCACTCTCCCACAAATTGTGGCAGGGTTTAGGGAGCTGAAGTATGTCTACCTAGAGGACGTAGGGGGCACCCCTCACTTCTCTTTCTCAAGCTATAGTGGCCTAGACTTCAAAGACTGGGGGGCTGATGATGCGTTTGCCTACATGTACACAGGCTACATATCAGGAGGGGACTTCCAACGCTACAAGCAAGTTCCTTATCTGACCACTCACATGGCTCAGACAGAGACAGAGGTTACACAAGACTTTGAACTTCTAAATCAGTCTGGTTGTAAGGCTCGTGTAGCTTGGGAGTGGTCTAATAACGTCAACTCAGGCAGGTGGAGTCGTCAATTCCAAATCTACCGTTTCAAGCGTTTCTACGTTCCTGACGGAGGTTCTGGGGACTTTGACAATGGCTTCTCTGTTGTTACAACTAAGAACAAGCTGAGGGGCAAAGGCAGGGTCTTGAGCTTACATTTTGAGACAGAGCCAGATAAAGATTGTCATATTCTTGGCTGGTCGTTCTTCTTGGGGGTTAGCGGTAATGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c9db59ef6a688a8668174a82e13093f94c9a8992861ff53e2823eeb42754ff1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6865
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequence and Structural Characterization of Great Salt Lake Bacteriophage CW02, a Member of the T7-Like Supergroup Shen,P.S., Domek,M.J., Sanz-Garcia,E., Makaju,A., Taylor,R.M., Hoggan,R., Culumber,M.D., Oberg,C.J., Breakwell,D.P., Prince,J.T. and Belnap,D.M. 2012 22593163 GenBank