Protein

View in Explore
Genbank accession
AUR96338.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSPSEKYPGAVDVDPDYQGGKFRDNNPSTTNNGSPLKAIDRNELLARDEAIMNDAGFEYNGLPDTPQDSQLFKAYKASLGNGANLLSNHNFLIQTPDDSQPLPSATPTSYPPGYQIFSGVFANETTGITNLTYIDGRVSFSGGDLYFAVPNAGALARVDSSDLVASVADFDGKPRTRGVSFALVGDEYRVTVGVDALEDETANATPLGSVKFEEGKEATKHETTEGLTAQTAGGVTNLQATSVQNMIDGKAADGDVNLSDTQYWDLNGTKYKCNTNVTPAPNGVGDFEALNSFNVVDYGAKGGDPSHDDYFGILAACTAMQNAGGGVLEFPLPAGDGTYYINQYRIDGGPDANGIVNWVFEDVPVIIKGNYSKLKMIGGWTRRQNNGSNSYDNCVGFNIRGGTSYAINLSIDGGAKTITKVAPTEGVSYGILYSGVKSITEKNIHISYYTTDGVSYSARAVSGQAYDYASCENCVCENSSFLLNGRQGASVTSLKTGTFTNVNYGGSGESPYGGHSPRAAVDVEPPRSPETALTTDVWTGELLYQNCKFQAKDGFPFVATGDVSGIKLIKGKIVHVNCTYDATDGSDRRFVTTVVPDGFLSINPTFVNCGIAPSFANSAYNFSHYMGGSMDINQTGFRMLTGGVNSKIYIDSMDFTYNVDASYDSTYILHDGTGYMKDCNVFIGSNAHPRASDRHTAVSFNNPDFKCDRIDFDTDISDGNYFYFCSHLCDVENEKYLNPSKISPLTSPYTQTKFSRGDYNVDQVTFNTGNRVFFGDPVAGQTYAKGDTAILSASSGGKGFSKCTTAGAQGVDAVFNLCGAID
Physico‐chemical
properties
protein length:824 AA
molecular weight: 88133,87760 Da
isoelectric point:4,66127
aromaticity:0,10801
hydropathy:-0,36019

Domains

Domains [InterPro]
DC_0205
STR
1–818
DC_0205
IPR012334
STR
294–669
IPR012334
AUR96338.1
1 824
Architecture
STR
STR 1-818 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR96338.1
1 824
Domain Start End Length (AA) Confidence
N-terminal 1 308 308 0,7682
Central domain 309 736 429 0,9892
C-terminal 737 824 87 0,8577
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-308
Central
309-736
C-terminal
737-824

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.223.O._10N.261.48.A9
[NCBI] 		1881350 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR96338.1 [NCBI]
Genbank nucleotide accession
MG592590.1 [NCBI]
CDS location
range 28534 -> 31008
strand +
CDS
ATGGCTTACTCACCTAGCGAAAAGTATCCGGGCGCAGTCGATGTCGATCCGGATTATCAAGGCGGTAAATTCCGCGATAACAATCCATCAACAACGAATAACGGCTCTCCGTTAAAAGCCATTGACCGTAACGAGTTACTTGCTCGTGATGAAGCGATCATGAATGACGCCGGTTTTGAGTACAACGGTCTTCCAGACACGCCTCAAGACTCCCAATTATTCAAGGCTTATAAGGCCTCGCTTGGTAATGGCGCGAACCTGCTGTCAAACCATAACTTTCTAATTCAGACGCCTGATGACTCTCAGCCGTTACCTAGCGCCACGCCAACAAGTTACCCGCCTGGTTATCAAATCTTCTCTGGTGTTTTTGCTAATGAAACAACCGGAATCACTAACCTAACTTACATTGATGGTCGCGTGTCGTTCAGTGGTGGTGATTTGTATTTTGCTGTGCCGAATGCTGGCGCATTGGCTCGCGTCGATTCTAGTGATTTAGTTGCATCGGTGGCAGACTTTGACGGTAAACCTCGCACTCGTGGTGTGTCATTTGCTTTGGTTGGTGATGAGTATCGCGTGACTGTTGGTGTTGATGCACTTGAGGATGAAACAGCTAATGCTACGCCACTTGGGTCTGTGAAGTTTGAGGAAGGGAAAGAGGCGACAAAGCATGAAACGACAGAGGGATTGACGGCGCAGACTGCTGGGGGTGTGACTAACCTGCAAGCTACCAGTGTGCAGAATATGATTGATGGTAAGGCGGCTGACGGTGACGTTAACTTATCAGACACGCAGTACTGGGATTTAAATGGAACAAAATATAAGTGCAACACAAATGTAACGCCAGCGCCGAACGGAGTTGGTGACTTTGAAGCGTTAAACTCATTTAATGTTGTTGATTATGGCGCGAAAGGTGGAGACCCGTCTCATGATGACTATTTCGGAATACTGGCAGCGTGTACTGCTATGCAGAATGCAGGTGGAGGAGTGTTGGAATTCCCACTACCAGCGGGGGATGGTACATACTACATCAACCAATACAGAATCGACGGTGGCCCAGACGCAAACGGGATTGTAAATTGGGTTTTTGAGGATGTACCTGTAATAATCAAAGGTAATTACTCAAAATTAAAAATGATAGGCGGCTGGACCAGAAGACAAAACAACGGAAGTAACTCTTACGACAACTGTGTTGGCTTTAACATTAGAGGTGGCACTTCTTACGCCATCAATTTATCAATTGATGGCGGAGCTAAAACTATAACTAAGGTCGCCCCTACTGAGGGCGTTAGTTACGGTATTTTGTACTCCGGCGTAAAAAGCATTACAGAAAAAAATATTCATATTTCATACTACACAACGGACGGTGTGTCCTATTCAGCAAGAGCCGTTTCAGGACAAGCGTATGACTATGCGAGCTGTGAAAATTGCGTTTGTGAGAACTCTAGCTTTCTGCTCAATGGAAGGCAAGGAGCTTCAGTAACATCTTTAAAAACCGGCACGTTTACAAACGTAAATTACGGAGGCAGCGGAGAATCACCTTACGGAGGTCACTCACCGAGGGCTGCTGTAGACGTTGAGCCACCAAGATCGCCAGAAACGGCGCTCACCACCGACGTATGGACTGGTGAGTTGCTGTACCAAAATTGCAAATTTCAAGCTAAAGACGGTTTTCCATTCGTTGCAACTGGTGATGTTTCAGGAATAAAGCTAATTAAAGGAAAGATTGTTCATGTAAATTGCACTTATGACGCTACAGATGGTTCTGATAGACGATTTGTAACTACCGTTGTGCCCGATGGTTTCTTATCAATCAATCCAACTTTTGTTAATTGCGGTATAGCTCCATCTTTTGCCAATTCAGCATATAACTTTTCGCACTACATGGGCGGAAGTATGGATATAAACCAGACTGGGTTCAGAATGCTTACAGGTGGAGTTAATAGCAAGATTTATATTGACAGTATGGATTTTACCTACAATGTAGACGCCTCGTATGATAGCACTTACATTCTTCATGACGGAACTGGTTACATGAAAGATTGCAATGTATTTATCGGCAGTAATGCACACCCAAGGGCATCCGATAGGCATACGGCAGTTTCATTTAACAACCCAGACTTTAAGTGCGATAGGATTGATTTTGATACTGACATATCAGATGGTAATTACTTTTACTTCTGTAGTCATCTATGTGATGTGGAGAATGAGAAATATCTAAATCCAAGCAAAATCAGCCCTCTAACATCACCATACACACAGACTAAGTTCAGTAGGGGTGACTACAATGTTGATCAAGTAACATTTAACACAGGGAATAGGGTGTTTTTTGGTGACCCAGTTGCTGGGCAAACTTATGCTAAGGGCGACACTGCTATATTGTCTGCTTCATCCGGTGGTAAGGGTTTTAGTAAGTGTACGACGGCGGGCGCTCAGGGTGTAGATGCCGTATTTAATTTGTGCGGTGCAATAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
775af8647900ffc4a56d894073015a56ad1fb2279fa654e33e2a64b635c44add
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6731
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank