Protein

Genbank accession
USS70694.1 [GenBank]
Protein name
tail tubular protein b
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,61
Protein sequence
MALISQSIKNLKGGISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHVKRLTDQFGLGQKPYCHIINRDEVERYAVFFTGSNIRVFDLFTGDEKTVNASNGLSYVTSSNPRKDLRMVTVADYTFILNRNVSTAQGTTNTPSGLAPFGHFGLVVIRGGQYGRTYRVKVNGSVEASFETPLGDQVEHAKQIDIAYIIDQLAAGLINRGWAVTKGSGYFYFSKSGTVIINSLEVEDGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVKFDASRNVWTECPAPNIKADYNKDTMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSINDIFFFRNRLGFLSGENVILSGSGNYFNFFPESVAVLTDTDPIDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQTRPFGIGRGVYFVSPRAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCCDMIGAVMHLVIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPANGQYVFISLGGVTFTFDPPAGGWQVNDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTAGGVATEDIGRLQLRRAWVNYDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAVSGNATQVTVSLISDTPNPLSIIGGGWEGYYVRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 88795,17820 Da
isoelectric point:5,15305
aromaticity:0,12469
hydropathy:-0,30466

Domains

Domains [InterPro]
IPR058003
1–794
IPR058003
USS70694.1
1 794
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ICP3
[NCBI] 		979535 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USS70694.1 [NCBI]
Genbank nucleotide accession
ON464736 [NCBI]
CDS location
range 23328 -> 25712
strand +
CDS
ATGGCTCTTATCAGTCAAAGTATTAAGAACCTTAAAGGAGGTATCAGTCAACAACCTGATATCTTACGGTATTCAGACCAAGGTTCCAAACAGATTAACGGTTTCTCTTCAGAGGTAGAAGGTCTTCAAAAGAGACCTCCCTCAGTTCACGTAAAGAGATTAACCGACCAGTTTGGCTTAGGGCAAAAGCCTTATTGTCATATCATTAACCGTGATGAAGTAGAGCGTTATGCAGTGTTCTTTACAGGTTCAAACATTCGGGTATTCGATTTGTTTACTGGTGATGAGAAAACTGTGAATGCTTCTAACGGTTTATCTTACGTGACTTCTTCTAACCCTCGTAAAGACCTTCGTATGGTGACTGTTGCTGATTATACGTTCATTCTTAATCGTAACGTATCGACTGCTCAAGGTACAACTAACACTCCAAGTGGACTGGCTCCTTTTGGTCACTTTGGGTTGGTGGTTATCCGTGGTGGTCAATATGGTCGTACCTATCGAGTCAAAGTTAATGGAAGCGTAGAGGCATCTTTTGAGACTCCTTTAGGCGACCAAGTGGAACATGCAAAACAAATAGACATTGCGTATATCATTGACCAGTTAGCGGCAGGTTTAATCAACAGGGGATGGGCTGTAACTAAAGGTTCCGGTTATTTCTATTTCTCAAAGAGTGGTACTGTGATTATCAACTCTCTGGAAGTAGAGGATGGTTACAACGGTCAGTTGGCTTGGGGTATCATTAACGATGTTCAGAAGACAACTCAGTTACCTGTCTATGCGCCTAACAACTACATTATCCGAGTGTCTGGAGACCCTACGTTGAATCAGGACGATTACTACGTTAAGTTCGATGCTTCTCGTAACGTCTGGACTGAATGTCCTGCTCCTAATATCAAAGCGGATTATAACAAAGATACCATGCCTCATGTGTTGATTCGTGAAGCTGACGGTACGTTTACCTTCAAGCAAGCTGATTGGACTCATAGAGCTGCTGGTGATGATGATACGAACCCGTATCCATCCTTCATTGGGAATAGTATTAACGATATCTTCTTCTTCCGTAACCGTTTAGGTTTCCTGAGTGGAGAGAACGTAATCCTTTCAGGTTCCGGTAATTACTTCAACTTCTTCCCTGAGTCAGTCGCGGTGTTAACCGATACAGACCCCATTGACGTAGCTGTAAGTACAAACCGAATCTCAATCCTGAAGTATGCTGTGCCATTCTCAGAAGAGTTAATTCTGTGGTCTGACCAAGCTCAGTTCGTATTAAGTTCTGATGGTGGTCTTACACCAACAACTGTACGATTAGACTTGACGACTGAATTTGAAGTGACTGAACAGACTCGTCCTTTCGGTATTGGACGTGGTGTGTACTTCGTGTCACCTCGTGCTAAGTTCAGTTCTGTACGTCGATTTTATGCGGTTCAGGACGTTACCCAAGTGAAGAACGCAGAGGATATTTCAGCACACGTTCCTTCTTATGTTGAGAATGGTGTATTCAAAATGTCCGGTAGTTCCACTGAGAACTTCTTAACGATTCTGACTGAAGGTAATGAACAACGAGTTTACTTCTATAAGTTCCTCTATCTGCAAGAACAGTTAGTTCAACAATCATGGTCTCATTGGGACTTTGGTGTGAACTGTCGAGTTCTCTGCTGTGATATGATTGGTGCTGTGATGCATCTCGTTATTGACAGTCCGTCAGGTGTTCTTATGGAGAAGATTGAGTTCACTCAGAATACGAAAGACTATCCAGACGAACCTTATCGTCTGTACGTTGACCGTAAGATTGAATATACGTTCCCTGAAGGCTCATACAATGATGATGATTTTAAGACTCGTGTGAAACTCAAGGATATCTATGGCTCCACTCCTGCAAATGGACAATACGTGTTTATCTCACTTGGTGGGGTTACTTTCACGTTCGACCCTCCTGCTGGTGGTTGGCAAGTCAATGATGGATTGATTGAGTTTGATGGCGATTTACGTGGTACTAAGTTCTTCGTTGGGGAAGCTTACACGTTCCTCTATGAGTTCTCGAAGTTCCTCATTAAGACAACCGATACGGCTGGTGGTGTAGCTACTGAAGATATCGGTAGGTTGCAACTTCGTCGTGCTTGGGTGAACTACGATAAGTCAGGTAACTTCCGAGTCGAAGTGAACAACCAAGGTCGAACCTTCACATATAACATGACAGGGAACCGTTTGTCTACCAATGAGCTTATCCTTGGTGATGAGTCTCTGGATACAGGCCAGTTCCGTTATGCGGTGTCTGGTAATGCAACTCAAGTAACTGTAAGTCTCATCTCAGATACTCCTAACCCATTATCCATCATCGGTGGAGGCTGGGAGGGATACTATGTGAGACGTTCATCTGGTATTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
ddfc2b0bca16caaff3bef5e38771d5b7909585562021c47cc1435186692d88a6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2346
Evidence 0,2346
Download PDB

Literature

Title Authors Date PMID Source
The Vibrio cholerae Seventh Pandemic islands act in tandem to defend against a circulating phage O'Hara,B.J., Alam,M. and Ng,W.-L. — — GenBank