Protein

View in Explore
Genbank accession
YP_004306767.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTVAIQRESGDIIWFDAILNLNISRANQVTQHVVESGASVTDHVIAQNQKMTLSGVVSDADFNLDRPVITAADAQAFGITPKPFVNSTPVTSGPIITPGADTAWTNFLPETVNQFLDLDRPTVVVPAAPKEKGANLIREELDRITRDRERIVLLDFEGSAVRTIFQNVVITSISFKEDPQSGESLYVDLAFEVIRTTTFQTAAIPKKVSESIKNKASEKQAKGKQAPKDEKVTDADGKNPKGETVLHRMTNREVR
Physico‐chemical
properties
protein length:255 AA
molecular weight: 27983,28640 Da
isoelectric point:5,52943
aromaticity:0,05490
hydropathy:-0,31020

Domains

Domains [InterPro]
IPR048494
ATT
15–205
IPR048494
DC_1100
STR
26–255
DC_1100
YP_004306767.1
1 255
Architecture
ATT
STR
ATT 15-205 | STR 206-255
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage KPP10
[NCBI] 		582345 Uroviricota > Caudoviricetes > Vandenendeviridae > Nankokuvirus KPP10 >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004306767.1 [NCBI]
Genbank nucleotide accession
NC_015272.2 [NCBI]
CDS location
range 10611 -> 11378
strand +
CDS
ATGACGGTAGCTATTCAACGAGAGTCCGGGGATATCATCTGGTTCGATGCGATTCTGAACCTGAACATCTCCCGGGCTAACCAGGTGACTCAGCACGTGGTAGAATCGGGAGCTTCGGTTACCGACCATGTGATTGCTCAGAATCAGAAGATGACCCTTTCGGGGGTCGTCTCTGACGCTGACTTCAACCTGGACAGGCCAGTTATTACGGCTGCTGACGCACAGGCTTTCGGGATCACCCCTAAGCCTTTTGTCAATAGTACGCCAGTGACATCGGGCCCCATCATCACCCCGGGGGCAGACACGGCCTGGACGAACTTCCTCCCGGAGACGGTCAACCAGTTCTTGGACCTGGACAGGCCCACCGTGGTGGTTCCAGCGGCTCCCAAGGAGAAGGGGGCAAACCTGATCCGAGAAGAACTGGACAGGATCACCAGGGACCGTGAGAGGATTGTCCTGCTGGACTTCGAAGGCTCTGCTGTGAGGACCATCTTCCAGAACGTGGTGATCACCTCGATCAGCTTCAAGGAAGACCCGCAGAGCGGTGAGTCGTTGTATGTGGACCTGGCATTTGAGGTGATCAGGACAACCACCTTCCAGACGGCAGCCATTCCTAAGAAGGTGAGCGAATCGATCAAGAACAAGGCTAGCGAGAAGCAGGCCAAGGGCAAGCAAGCCCCGAAAGATGAGAAGGTAACGGATGCAGACGGGAAGAACCCGAAAGGGGAAACCGTATTGCACAGGATGACTAACCGGGAGGTGCGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2e777c1492b64e0041e50318a7975bbf6dd519420078555e8a8bce5bb7cd9ccb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic characterization of Pseudomonas aeruginosa bacteriophage KPP10 Uchiyama,J., Rashel,M., Takemura,I., Kato,S., Ujihara,T., Muraoka,A., Matsuzaki,S. and Daibata,M. 2012 22218962 GenBank
Blood kinetics of four intraperitoneally administered therapeutic candidate bacteriophages in healthy and neutropenic mice Uchiyama,J., Maeda,Y., Takemura,I., Chess-Williams,R., Wakiguchi,H. and Matsuzaki,S. 2009 19457172 GenBank