Protein

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Genbank accession
UGL60231.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,72
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPYAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPANTELQVIEYTPIQLGTGGGGSGASAITWIYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVIYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINVKNELLTHTDGKYRWDGEFPKIVPDGSTPATSGGIGVGAWISVGDAALRSDLNSMNGASIVKTSSGLTVQQELDKNKREILFSNLNSAMTDADEKDSLQIKWKYGNVRYTPSLTTGTPSTGDGYNFFDANGKGFIVAENHEFNPNGMISYTELWVDAGLDPSIFRLAKSFGISTFVVYTYMAPGVQSYLTSWIKCAELYGIQIILQVFPEVSQDLDMQVEYFNSHMLMPNVVGFYLVDEPTPSTVPLAVQAQMITKVRAIRNLTTYAATNQDVFGGDKYIHKDMDYIFLSVYAYFQTNTYAGYGYYLANTVAQYEENGLRKGRIIPLLTTYRFTDEGTNVTDDFVHAGNCYWIERFKKVAFWQFYTQHTPSDVHRVIENNAEVSVLAKRALRKIQDTQSQECLLLGTKHGQSTLFNSSTDRYLLGGSAKKYLFDWFNKASSGVMTTSGTFDGAWTLTTGEALIVDLQDTYNLEYVRFNVINGTGDNVVYRLIVNPVDMGLTIVSDLEYIGSSDVIFTIPESLANRTKQLGLFIVSRTGTTPPRDISVNDIRLVASKVISQSR
Physico‐chemical
properties
protein length:999 AA
molecular weight: 109064,78750 Da
isoelectric point:4,70351
aromaticity:0,10511
hydropathy:-0,13694

Domains

Domains [InterPro]
DC_1946
ATT
1–926
DC_1946
G3DSA:3.30.2020.50
ATT
336–421
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
IPR040775
RBD
417–482
IPR040775
UGL60231.1
1 999
Architecture
ATT
ATT 1-926 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL60231.1
1 999
Domain Start End Length (AA) Confidence
N-terminal 1 561 561 0,9951
Central domain 562 764 204 0,6602
C-terminal 765 999 234 0,3574
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-561
Central
562-764
C-terminal
765-999

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenAc-pSC20
[NCBI] 		2894724 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL60231.1 [NCBI]
Genbank nucleotide accession
OK539832.1 [NCBI]
CDS location
range 88818 -> 91817
strand +
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTACGTTACAATCCTGATAGTGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGTTGTCTTTGGGGGGCGGTGGAATACGCTGGGAAACGCTCCCTTACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGATCCACTGAAGACATGGCTATAACAACTGATAACGTATCAGCAACGTTTACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGTCTTGGCCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCAAAATATTCACTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAACACAGAACTTCAGGTGATTGAATATACTCCGATTCAGTTGGGCACTGGCGGCGGGGGTTCGGGCGCTTCTGCAATCACCTGGATTTACAATGGCGGATCCGCTATCGGTGGCGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCATTTATTTTAGTGTTGGTGCTGTGTTAAGTGGATATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTACTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATACGTAACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATGTTAAAAATGAATTACTCACCCACACGGATGGTAAGTATCGCTGGGATGGGGAATTCCCCAAAATCGTTCCGGATGGTTCAACTCCGGCGACGTCTGGTGGCATTGGTGTTGGCGCATGGATTAGTGTTGGTGATGCAGCACTAAGAAGTGATTTAAATTCAATGAATGGAGCATCAATAGTTAAGACTTCTTCAGGGTTAACAGTGCAACAAGAGCTTGATAAAAATAAAAGAGAGATACTATTTAGTAACCTTAATTCTGCAATGACCGATGCGGATGAAAAAGATTCTTTGCAAATCAAATGGAAGTATGGAAATGTTAGGTATACTCCCTCCCTAACAACAGGAACACCGTCAACTGGCGATGGTTACAATTTTTTCGATGCTAACGGGAAAGGATTTATTGTTGCTGAAAACCATGAATTCAACCCTAATGGGATGATTTCATATACTGAATTATGGGTTGATGCAGGACTTGACCCCTCTATCTTCAGGCTTGCTAAATCTTTTGGCATATCAACATTCGTTGTTTACACTTACATGGCACCAGGGGTTCAATCGTATCTGACATCCTGGATTAAGTGCGCAGAGTTGTATGGTATCCAAATTATTCTTCAGGTGTTCCCAGAAGTATCTCAGGATCTCGATATGCAGGTCGAATACTTTAATTCACATATGCTTATGCCTAACGTTGTCGGGTTCTATCTCGTTGATGAACCTACACCAAGCACGGTGCCACTTGCCGTTCAAGCGCAAATGATAACAAAGGTTCGCGCTATTCGTAATTTAACAACATATGCAGCTACTAACCAAGATGTGTTTGGTGGTGACAAATATATTCATAAAGATATGGATTATATTTTCCTATCAGTATACGCATATTTCCAGACAAACACATATGCTGGATATGGTTATTACCTTGCTAATACAGTTGCACAATATGAAGAGAATGGGTTACGCAAAGGGCGTATAATCCCTCTGTTGACAACATATCGATTTACGGACGAAGGTACTAATGTTACTGATGATTTTGTTCATGCTGGTAACTGCTACTGGATTGAGAGATTTAAAAAAGTTGCCTTTTGGCAGTTCTACACACAGCATACCCCATCAGATGTTCACCGTGTGATAGAAAATAATGCTGAAGTAAGTGTTTTAGCTAAACGTGCCTTGCGTAAGATTCAGGATACACAAAGCCAGGAATGCTTGTTACTGGGGACCAAACATGGGCAATCAACACTGTTTAACTCCAGTACTGACAGATATTTACTTGGTGGTAGTGCCAAGAAATATCTGTTCGATTGGTTCAACAAAGCTAGTTCAGGGGTGATGACAACTTCAGGTACTTTTGATGGTGCGTGGACCTTAACTACAGGTGAAGCTTTAATAGTGGATTTACAGGATACGTATAATCTTGAGTATGTTAGGTTTAATGTTATAAATGGAACTGGTGATAATGTTGTATACAGGCTAATTGTTAATCCTGTAGATATGGGGTTAACTATAGTTAGTGATTTGGAGTATATAGGGTCTTCTGATGTCATATTCACGATACCAGAATCTTTAGCTAACAGAACAAAACAACTTGGTTTATTCATTGTTTCAAGAACAGGAACAACACCACCAAGGGACATTTCTGTAAATGACATTAGATTAGTAGCATCAAAAGTTATAAGTCAAAGTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
787044ee49ef439e0e337e407ca0ae531e365f9dde8c159562dad442b33ea3e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella virus vB_SenAc-pSC20 Park,S.Y., Kwon,H.M. and Kim,J.H. 2012-09-15 — GenBank