Protein

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Genbank accession
USZ80544.1 [GenBank]
Protein name
prophage tail fiber N-terminal domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MEKKTYFAQDREGNLIPNATVHIYLAGTDTLATNIVAVNGEPLRNPFTTDADGAAIFSMPTGEYDIRFSKGTLVGQRIRFQCLDVRETVDEAAKHSADAKESADRADDAAINAQSIADADTYYITPEDPDGTIAGLAGTAEGKSFRVAQGMGDELSFIYYRKTNGEAVAIADAASASSVKNIADLIKKSVGAQTFMRWRDRLGIVVSYWSADSDGGVNFVSKLVKFSRKGFFSENTELSDNVLKNKDFSVIKSDSGSFKLKDKFGMVLLKIKAGILYLPAINAVFNAATKLTYGKNKISLGGGGDILTIKDSRGVVGLRIDSSCVVHAKLADNNVTPPVQVTSEDSIISMVQSYAEAAKANVGRRIFNNVPALGNPNKAKKKVSFWIVYGQSFSVGAQSGVALSLTQSLGNVMLGDSPRGMKYSTNATYEYAPLGGVNVFKPLVEVMQDNAGNIVANTSGGYGETIASSFANNLKAYHNQSMGIANDDDFIIGVACCGVSGRTIEQLKKGASPEIYNRVETCLDGIAEAADSAGYDWEIGGIIYIQGENDNGQPFSFYYPRLQSMMDTLIASCMTKSGQSKKPLFMLNQLGNTYVRAMGVPSAQIELALKNDNVVLVGSYQGLSNPGAHLSANSYRQLGAAFAKDAFKHISGYGSYPFKCEKAVFHGDSIYLGMTPHVTPLKFNKVFNGWNYVEHADKGISVSDSSGAIASTDLSVTVVSPTVIKVQCSRTLTGTVTVTIGDASHNGTHNISDSSTEVAYDKWTYGVPNQYPQENVAELVGKNYSLTTFSAIQSIECKEI
Physico‐chemical
properties
protein length:800 AA
molecular weight: 85831,65860 Da
isoelectric point:6,07247
aromaticity:0,08875
hydropathy:-0,16213

Domains

Domains [InterPro]
DC_0547
STR
70–797
DC_0547
IPR036514
STR
383–653
IPR036514
SSF52266
STR
384–646
SSF52266
IPR005181
ENZ
469–646
IPR005181
USZ80544.1
1 800
Architecture
STR
STR 70-797 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USZ80544.1
1 800
Domain Start End Length (AA) Confidence
N-terminal 1 634 634 0,6456
Central domain 635 789 156 0,4760
C-terminal 790 800 10 0,9849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-634
Central
635-789
C-terminal
790-800

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage MQ-4
[NCBI] 		2961710 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia liquefaciens
[NCBI] 		614 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USZ80544.1 [NCBI]
Genbank nucleotide accession
ON853583.1 [NCBI]
CDS location
range 11487 -> 13889
strand +
CDS
TTGGAAAAGAAAACTTACTTTGCGCAAGATCGTGAAGGCAACCTAATCCCAAACGCGACCGTGCATATTTATTTAGCCGGAACCGATACGCTGGCAACAAACATTGTTGCAGTTAACGGAGAACCACTCCGCAACCCGTTCACCACAGATGCTGACGGTGCCGCCATTTTCAGTATGCCAACTGGTGAATATGACATCCGCTTTTCCAAGGGGACGTTGGTTGGTCAGCGCATCCGGTTCCAGTGCTTAGATGTTCGCGAAACCGTTGACGAGGCAGCCAAACATTCTGCTGATGCCAAAGAGTCAGCCGACCGAGCGGATGACGCGGCAATAAACGCGCAGAGCATAGCCGACGCCGACACGTACTACATCACACCAGAAGATCCAGACGGAACGATTGCCGGGCTGGCCGGTACGGCTGAGGGTAAATCATTCCGAGTGGCGCAGGGCATGGGTGATGAACTGTCATTTATCTATTACCGAAAAACAAACGGTGAGGCGGTTGCAATTGCTGACGCCGCAAGCGCGAGTTCCGTAAAAAACATTGCCGATTTAATAAAAAAATCCGTAGGTGCACAAACATTCATGAGATGGCGCGACCGTCTTGGGATTGTTGTTTCATATTGGTCTGCTGATTCTGATGGCGGCGTAAATTTCGTTAGCAAGTTAGTTAAATTTAGCAGAAAAGGTTTTTTCTCAGAGAACACAGAGCTGTCAGATAACGTTTTAAAAAACAAAGATTTTTCAGTGATTAAAAGTGACAGCGGATCTTTTAAATTAAAAGATAAATTCGGCATGGTTCTGCTGAAAATAAAAGCAGGGATTCTGTATCTTCCAGCAATTAACGCTGTATTCAATGCTGCCACCAAACTGACCTACGGCAAGAATAAAATAAGTCTTGGCGGCGGCGGTGATATTCTTACCATAAAAGACAGCCGCGGCGTTGTTGGCTTGCGCATTGATAGTAGCTGCGTAGTCCACGCCAAATTAGCTGACAATAACGTCACACCGCCTGTTCAAGTTACATCAGAAGATTCTATTATCTCAATGGTTCAGTCTTATGCTGAGGCGGCCAAGGCGAATGTAGGCAGACGCATTTTCAATAACGTGCCTGCGCTTGGTAACCCAAACAAAGCCAAGAAAAAGGTTTCATTCTGGATTGTCTATGGTCAATCGTTCTCAGTTGGTGCGCAAAGCGGCGTAGCCTTATCACTTACCCAATCCTTGGGTAACGTGATGCTTGGTGACTCCCCGCGCGGTATGAAATACTCAACTAACGCGACCTATGAATATGCGCCATTGGGCGGCGTTAACGTGTTCAAGCCGCTGGTTGAGGTGATGCAGGATAATGCCGGGAATATCGTAGCCAACACTTCTGGCGGCTATGGCGAAACTATCGCGTCATCCTTTGCTAATAACTTGAAGGCGTATCATAACCAAAGCATGGGCATCGCAAATGATGATGACTTTATCATTGGCGTAGCTTGTTGTGGTGTGTCTGGCCGCACCATTGAGCAGCTAAAAAAAGGCGCTAGCCCTGAAATCTATAACAGGGTTGAAACCTGTTTAGACGGTATTGCTGAGGCTGCCGATTCCGCTGGGTATGATTGGGAGATCGGCGGCATAATCTACATTCAGGGTGAGAATGATAACGGCCAGCCGTTCTCGTTTTACTACCCACGCTTACAATCAATGATGGACACCCTGATCGCATCTTGCATGACAAAAAGCGGCCAGAGCAAAAAGCCACTGTTCATGCTGAATCAGCTTGGTAATACCTACGTTCGTGCAATGGGTGTTCCATCTGCGCAAATAGAATTAGCGCTGAAAAATGATAACGTCGTGCTTGTTGGATCGTATCAAGGGCTATCGAATCCGGGCGCACACCTATCAGCTAACTCTTACCGTCAGCTAGGCGCGGCGTTCGCTAAAGATGCGTTCAAGCATATATCTGGTTACGGTTCGTACCCGTTTAAATGTGAGAAGGCGGTATTCCACGGCGACTCGATTTATTTGGGCATGACTCCGCATGTAACGCCGTTGAAGTTCAACAAGGTTTTCAACGGATGGAACTATGTAGAACATGCTGACAAGGGTATTTCAGTTTCAGATTCTTCCGGGGCCATTGCTTCTACTGATCTAAGTGTGACCGTGGTTTCACCGACAGTAATCAAGGTTCAGTGCAGCAGGACGTTGACAGGGACTGTTACTGTCACCATTGGCGATGCGTCACATAACGGAACGCATAACATCAGTGACAGCAGCACCGAGGTTGCTTATGATAAGTGGACGTATGGCGTGCCAAATCAATACCCACAAGAAAACGTTGCGGAGTTGGTTGGTAAAAATTACTCGCTAACTACGTTTTCAGCAATTCAATCTATTGAGTGTAAGGAAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
003a9aca6705805281faa80d8158a2645874499511acaca91e69e8cac4627c2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7816
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50