Protein

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Genbank accession
WWO60213.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
Protein sequence
MIENRLAGFFTVTVHNADGTVKEQHEFKNLITDTGLNSMGSFTGGSNMLRNCQVGTGSTPPTNGDSALASFLALQETQWSADSGYNATDDYHWRRWTYQFTQGKAAGNLTEIGIGMTGNTQGNLWSRALITDTSGNPTTLVITANEFLTVRYELRNYPKHGDTVQTVTIDGVERTITIRPMQVKSPGENWANLMPAINAYDGGQNANYDGIDLAPGPLGAEDSIPGSPVYLPQSTRVWAAYVPNSFRRVCNSTVPINMGNGTWPCITFNTGIGKWQMGINPPLVKNNTQELKIACAVSWARYTP
Physico‐chemical
properties
protein length:304 AA
molecular weight: 33136,65490 Da
isoelectric point:5,81249
aromaticity:0,09211
hydropathy:-0,38191

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage SB1
[NCBI] 		3117471 Uroviricota > Caudoviricetes > Autographivirales > Gujervirinae > Smasvirus
Host Xanthomonas euvesicatoria
[NCBI] 		456327 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60213.1 [NCBI]
Genbank nucleotide accession
PP079413.1 [NCBI]
CDS location
range 37818 -> 38732
strand +
CDS
ATGATCGAAAACCGCCTCGCTGGTTTCTTCACCGTCACTGTCCACAACGCGGACGGTACGGTCAAGGAGCAGCACGAGTTCAAGAACCTTATCACCGATACCGGCCTGAATAGTATGGGCTCGTTCACTGGTGGTTCCAACATGCTGCGGAACTGTCAGGTCGGCACCGGCTCGACGCCGCCGACCAACGGAGACTCCGCACTGGCATCGTTCCTCGCCCTGCAAGAGACGCAGTGGTCGGCGGACTCCGGTTACAACGCGACCGACGACTACCACTGGCGTCGCTGGACATACCAGTTCACGCAGGGTAAGGCGGCAGGCAACCTCACCGAGATTGGTATCGGCATGACGGGCAACACTCAGGGTAACCTGTGGTCCCGTGCGCTGATTACCGACACCTCGGGTAATCCGACCACTCTGGTCATCACCGCCAACGAGTTCCTGACCGTTCGATACGAGTTGCGTAACTACCCGAAGCACGGCGATACTGTGCAGACGGTTACCATCGACGGTGTGGAGCGGACCATCACCATCCGTCCGATGCAGGTGAAGTCCCCCGGTGAGAATTGGGCGAACCTGATGCCTGCGATCAACGCGTACGATGGTGGCCAGAACGCCAACTACGACGGCATTGATCTGGCTCCTGGCCCGCTGGGCGCGGAGGACAGTATCCCCGGATCGCCGGTGTATCTGCCGCAGTCCACCCGAGTGTGGGCAGCGTACGTGCCGAACAGCTTCCGCCGTGTGTGTAACAGCACCGTCCCGATCAACATGGGTAACGGTACGTGGCCCTGCATTACGTTCAACACCGGCATCGGTAAGTGGCAGATGGGTATCAACCCACCGCTGGTGAAGAACAACACGCAGGAGTTGAAGATCGCCTGCGCCGTCAGCTGGGCACGGTACACGCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
86798dd2c02fa58557240d789413ec2fb750e838609e7291523eaa600d71f8ac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8350
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank