Protein

View in Explore
Genbank accession
XYW65948.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MEEIQFGHDGRGNYFGIKLTEVPSDKTKEFKDLVTKSDMIPINMVDGVTSFGAALVRSQDEKEGRAALGITDAMLEGVPGPEGPVGPRGPEGQRGETGPQGQEGIDGAQGPQGPRGDPGPQGEQGIPGPQGPKGDPGPQGQRGEAGPAGLVWKGEYSNTATYAIDDAVVYQGTSYFSIAESTGIAPPDETYWAVLSAGGAKGDKGDKGDPGIQGPQGPQGPEGPRGEQGIPGPRGPEGDIGPKGDKGDKGDTGDKGDPGPQGPQGIEGPRGPEGAIGPSGVFDINTLSESDRRQLYTILRAYEPQRFWTQEGVISSVGSTVTIDIADSNATFIFTKRTASDYLGISVKVTDSSKPNSFAVRKIGWYDGGGMEGQTWDDYTMPDSPVMVDPVAYMRSRELQVWSIYNRITKNWYKLFISFDGPNTAGANAPCHVKVHTEKLTAGAPFAL
Physico‐chemical
properties
protein length:448 AA
molecular weight: 47112,42010 Da
isoelectric point:4,69430
aromaticity:0,07589
hydropathy:-0,66696

Domains

Domains [InterPro]
DC_0876
STR
9–232
DC_0876 G3DSA:1.20.5.320
IPR008160
STR
98–149
IPR008160 PTHR24637
IPR008160
STR
223–280
IPR008160
IPR008160
STR
223–275
IPR008160 DC_0588
XYW65948.1
1 448
Architecture
STR
RBD
STR 9-302 | RBD 303-447 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS4
[NCBI] 		3448186 No lineage information
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYW65948.1 [NCBI]
Genbank nucleotide accession
PV831792.1 [NCBI]
CDS location
range 75610 -> 76956
strand +
CDS
ATGGAAGAAATCCAATTTGGCCATGATGGCCGCGGAAATTACTTTGGCATCAAATTGACTGAAGTCCCGTCTGACAAAACCAAAGAATTTAAAGATTTGGTGACTAAGAGTGACATGATCCCCATTAATATGGTTGATGGCGTTACTAGTTTCGGTGCTGCGCTCGTACGTTCGCAGGATGAAAAAGAAGGAAGAGCTGCATTGGGTATAACCGATGCGATGTTGGAAGGTGTACCTGGCCCAGAAGGCCCAGTCGGACCCCGCGGACCAGAAGGTCAACGAGGAGAAACTGGCCCACAAGGTCAAGAAGGCATCGATGGCGCACAAGGACCACAAGGACCGCGAGGTGATCCTGGTCCGCAGGGTGAACAGGGAATACCTGGTCCGCAAGGCCCGAAAGGTGATCCTGGTCCGCAAGGTCAACGAGGGGAGGCAGGACCGGCAGGTCTTGTATGGAAAGGCGAGTATTCTAATACCGCAACGTATGCTATCGATGACGCTGTAGTTTACCAAGGCACTTCGTATTTTTCGATAGCCGAATCGACTGGCATTGCCCCGCCAGATGAAACGTATTGGGCCGTCTTGTCCGCCGGTGGCGCGAAAGGCGACAAAGGCGACAAAGGTGATCCCGGAATTCAAGGGCCTCAAGGGCCTCAAGGACCAGAAGGTCCGAGAGGTGAACAGGGTATTCCAGGGCCGAGAGGACCAGAAGGCGACATTGGCCCGAAAGGTGACAAAGGCGACAAAGGTGATACGGGTGACAAAGGCGATCCTGGTCCGCAGGGCCCGCAAGGTATTGAGGGTCCGAGAGGACCTGAAGGTGCGATTGGCCCATCTGGCGTTTTTGATATTAACACGTTATCCGAATCAGACAGACGTCAATTATACACGATCTTGCGGGCGTATGAACCCCAGAGGTTCTGGACACAAGAAGGCGTGATATCTTCGGTTGGTTCGACAGTCACAATAGACATTGCCGATAGCAATGCCACCTTTATATTCACTAAACGAACAGCTAGTGATTACCTTGGCATAAGCGTTAAAGTGACCGACTCGTCAAAACCAAACAGTTTTGCTGTACGTAAAATTGGTTGGTATGACGGTGGTGGTATGGAAGGACAAACATGGGATGATTACACCATGCCTGATAGTCCGGTTATGGTAGATCCGGTCGCCTATATGCGTTCGCGCGAGTTACAAGTTTGGTCGATATACAACCGAATTACCAAGAACTGGTACAAGTTGTTCATTTCATTTGATGGGCCAAATACTGCCGGCGCAAACGCACCATGCCATGTCAAAGTCCATACCGAAAAACTAACCGCAGGAGCCCCGTTTGCATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cca75c8facdaae84c1d2df441f5320d6f14570b6da2fb7891757a48864a76faa
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50