Protein

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Genbank accession
XYH44937.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MINISGFGLRGLLKASNTFPNGIDLTAFADDADSLDSPDLNIAQTSNGLNGHLLVWNQSGSLEVGVNVIPGSQDDVNLAALTEANRVGLDKRSVRDVISLVVSYPDGSVTSYSGGTIIVGSPAKSVTSQQRIRTRQYRFRFEKKNTVNEKPQEV
Physico‐chemical
properties
protein length:154 AA
molecular weight: 16551,27070 Da
isoelectric point:5,77151
aromaticity:0,05844
hydropathy:-0,26429

Domains

Domains [InterPro]
IPR054440
STR
2–143
IPR054440
XYH44937.1
1 154
Architecture
STR
STR 2-143 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF39
[NCBI] 		3446107 No lineage information
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH44937.1 [NCBI]
Genbank nucleotide accession
PV834959.1 [NCBI]
CDS location
range 12738 -> 13202
strand -
CDS
ATGATCAATATTTCGGGTTTTGGCCTTCGTGGTTTGCTGAAGGCTTCGAACACTTTTCCCAATGGGATCGATTTGACGGCTTTTGCAGACGACGCGGATTCTCTCGATTCCCCGGATCTGAACATCGCCCAGACCTCCAACGGCCTGAACGGACATTTGCTGGTCTGGAACCAGTCGGGGTCTCTGGAAGTAGGGGTAAACGTGATCCCCGGAAGTCAAGACGACGTGAACCTCGCCGCGCTGACCGAAGCGAACCGGGTCGGTCTGGACAAACGATCTGTTCGCGACGTGATCAGTCTGGTCGTGTCTTATCCTGACGGATCTGTCACTTCCTATTCTGGCGGGACAATCATCGTCGGTTCTCCGGCGAAATCCGTTACTTCCCAACAACGGATCCGGACTCGTCAATATCGTTTCCGTTTCGAAAAGAAAAACACCGTAAACGAAAAACCGCAAGAGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a7e4279bad501ea60d2a90a53e1ec8f4b32b25299432d97f5db4198988b98581
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50