Protein

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Genbank accession
WNV48539.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MCGLVGFCATTNASDNEIALLKSLLAVDIIRGAHATGLAKIDPVKNEVGIHKRAVDAYDFLADPETKEFLDKGRARIYMGHNRYATMGDKTDHANAHPFQVDHITMVHNGTVDSWGLHLLDGNDKYNVDSNMLCATIANHGAKKTFEEKFSGAAAVIWWDSKERTLNFIRNDERPLFMAVTTTGTIVWASEPGMLKVFLERPNAKIRLRSPIAELKAEVLVTIPFTEAGVRKGAEPQTTPVTFLDLPIPESERQAAAWWGRYVGVSDYEDYSRSQGSQAGTKGSQAGSSYGTSGDAYARNTLRINNNLDAAGSTFKHRQLVTFDVVKIEAYANGSEYGTVTGIEREENLLIEAHGINVAKVHGYTVLRGSISNAYFIGQDRDLKVTVEDLAVSCLDPKHRPTPGETTPVLRIGTISSETKSHSKPRVQVGGTLGNTPPANISYPLKVQGHTFNNVHVFRDFVSQGCASCGKIPTAYDQRNRHLTVYEGAKFTGSLDECEFICGECVIENK
Physico‐chemical
properties
protein length:510 AA
molecular weight: 55856,24340 Da
isoelectric point:6,39179
aromaticity:0,08039
hydropathy:-0,33451

Domains

Domains [InterPro]
IPR029055
ATT
2–199
IPR029055 DC_0532
cd00352
STR
2–198
cd00352
IPR029055
ATT
2–238
IPR029055
IPR029055
ATT
2–240
IPR029055
PF13522
STR
74–191
PF13522
WNV48539.1
1 510
Architecture
ATT
STR
ATT 2-240 | STR 241-510
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV48539.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,2079
Central domain 133 460 329 0,7110
C-terminal 461 510 49 0,7519
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-460
C-terminal
461-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Teru
[NCBI] 		3046814 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV48539.1 [NCBI]
Genbank nucleotide accession
OQ992551 [NCBI]
CDS location
range 20166 -> 21698
strand +
CDS
ATGTGTGGATTAGTAGGCTTCTGTGCCACAACTAACGCGAGTGATAACGAAATCGCTCTTCTAAAATCCCTCCTGGCCGTGGATATTATCCGTGGTGCCCACGCCACTGGTCTGGCCAAGATCGACCCGGTTAAGAACGAGGTAGGAATTCACAAGCGGGCAGTAGATGCCTACGACTTCCTGGCTGATCCTGAAACCAAGGAGTTCCTGGATAAGGGTCGGGCTCGCATCTACATGGGACATAACCGTTACGCCACCATGGGTGACAAGACGGACCATGCGAACGCCCACCCCTTCCAGGTTGACCACATCACCATGGTACATAACGGGACTGTGGATTCCTGGGGTCTCCATCTGCTGGACGGTAATGACAAGTACAACGTGGACTCCAACATGCTGTGCGCTACCATTGCCAACCACGGCGCCAAGAAGACCTTTGAAGAGAAGTTCTCCGGTGCTGCTGCGGTAATCTGGTGGGACTCCAAGGAACGTACCCTGAACTTCATCCGCAACGATGAGCGTCCGTTGTTCATGGCGGTGACCACCACTGGTACCATCGTGTGGGCATCCGAGCCTGGTATGCTCAAGGTTTTCCTGGAGCGTCCCAACGCTAAGATCCGCCTTCGTTCTCCCATCGCTGAACTGAAGGCTGAAGTCCTGGTAACTATCCCGTTCACGGAGGCCGGAGTGCGAAAGGGTGCAGAACCCCAGACCACTCCGGTTACATTTCTCGACCTTCCCATCCCCGAAAGCGAAAGGCAAGCAGCGGCATGGTGGGGTCGCTACGTCGGTGTCTCCGACTACGAGGACTATAGCCGAAGCCAAGGCAGCCAAGCGGGAACGAAAGGCAGCCAAGCGGGCTCGTCGTATGGAACGTCTGGCGATGCGTACGCAAGGAACACCCTCCGGATCAACAACAACCTCGACGCAGCAGGTAGCACCTTCAAGCACCGGCAACTCGTCACCTTCGATGTTGTCAAGATCGAGGCCTACGCAAACGGAAGCGAGTACGGAACTGTCACTGGAATCGAGCGTGAAGAAAACCTTCTCATCGAAGCTCATGGCATCAATGTCGCCAAAGTCCACGGCTACACCGTCCTACGAGGAAGTATCTCCAACGCCTACTTCATCGGCCAAGACCGTGATCTCAAGGTTACTGTCGAGGATCTGGCGGTAAGTTGCCTGGACCCAAAGCATCGGCCGACTCCTGGGGAGACTACCCCAGTGTTGAGGATTGGAACGATCTCATCGGAGACGAAATCCCATTCTAAACCCAGGGTTCAAGTCGGCGGCACCTTGGGGAATACCCCTCCGGCAAACATCAGCTACCCCTTGAAGGTTCAGGGACACACGTTCAACAACGTTCATGTCTTTCGGGACTTCGTATCCCAAGGGTGTGCATCCTGCGGTAAGATCCCTACCGCGTATGACCAGCGTAATCGTCATCTGACGGTGTACGAGGGTGCCAAGTTCACAGGTAGCCTGGATGAGTGTGAGTTCATCTGCGGCGAATGCGTAATCGAAAATAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8de1b1c3f3bcde43f7e64fbe5bf2be39b75cb140fa6db4df5d09e162fd3fefc1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5882
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo phages are active against extensively-drug-resistant eyedrop-associated Pseudomonas aeruginosa infections Cobian Guemes,A.G., Ghatbale,P., Blanc,A., Morgan,C., Garcia,A., Leonard,J., Huang,L., Kovalick,G., Proost,M., Chiu,M., Kuo,P., Oh,J., Karthikeyan,S., Knight,R., Pogliano,J., Schooley,R. and Pride,D. 2024-10-29 — GenBank