Protein

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UniProt accession
A0A8S5VGF2 [UniProt]
Protein name
Portal protein, Peptidoglycan hydrolase gp4, portal, tailspike, adhesin, VIRAL.5A
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MFGLDRKRAQEEPEKPMDGEMTAMVLTQPEGAQIIGEDEVRKAQDILRKYKSGKANLEARVVEDELWWELRHWEAIGRNKLKDNETQVTPTSAWLFNAILNKHADAMDNYPEAIVLPREQSDQQSAEMLGEILPAVMESSGFEGTYSGQWWEKLKHGTAVYGVFWDPQKENGLGDIEIRGIDLLNIFWEPGVQDIQQSRNLFIAQLVDVDALEEQYPQYAGKLLGGALDIKQYVYDDAVDTTDKAVVVDWYYKRRTISGKTVLHYAKFCGDCLLYASENEGRYQESGWYADGRYPVVMDTLYPEKGTPAGFGLVGICKDPQLYIDRLFGNILEYSLRASKPRVFASESAGINEREFLDWNKSVIHVEGNIDPSKLQQMTMDPLPSIYANILQLKIEEMKDTAANRDVNSGGTSSSVTAAAAISALQEAGNKSSRDMIAASYRAHNEITDMVIERMRQFYDVARAFRVVGPNGTDARFVDFSNAGLTPQPVGMDSMGQMLFREPVFDLKIKAQKRNPFSRMEQNQRALELYSAGFFAPENAQAAMGALNMMDFEGKEDVRDYVAQGQTLLNVVQQLTQQVQMLAAQMSARVGVDMAAQNAQEGQNRQGGVKGQTLDEKASQSQESNLTGYQQKLAARSGPNMNAGNPA
Physico‐chemical
properties
protein length:647 AA
molecular weight: 72306,49840 Da
isoelectric point:4,88408
aromaticity:0,08655
hydropathy:-0,49784

Domains

Domains [InterPro]
Coil
Unmapped
40–60
Coil IPR032427 IPR032427
A0A8S5VGF2
1 647
Architecture
STR
STR
STR 108-255 | STR 311-601 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5VGF2
1 647
Domain Start End Length (AA) Confidence
N-terminal 1 36 36 0,9825
Central domain 37 248 213 0,3509
C-terminal 249 647 398 0,1813
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-36
Central
37-248
C-terminal
249-647

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ct6BA50
[NCBI] 		2825221 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG05699.1 [NCBI]
Genbank nucleotide accession
BK016263 [NCBI]
CDS location
range 11512 -> 13455
strand +
CDS
ATGTTCGGATTGGACAGAAAACGAGCCCAGGAGGAGCCGGAGAAGCCCATGGACGGGGAAATGACTGCCATGGTGCTGACCCAGCCGGAGGGGGCGCAGATCATCGGGGAGGATGAGGTGCGCAAAGCGCAGGATATTCTCCGCAAGTATAAGAGCGGCAAAGCCAACCTGGAGGCCCGGGTGGTGGAAGATGAGCTCTGGTGGGAGCTGCGGCATTGGGAGGCCATCGGGCGGAACAAGCTCAAGGACAACGAGACCCAGGTGACGCCCACCTCGGCATGGCTGTTTAACGCGATCCTCAACAAGCACGCCGACGCGATGGACAACTATCCGGAGGCTATCGTCCTACCCCGTGAGCAGAGCGATCAGCAGAGCGCCGAGATGCTGGGAGAGATCCTGCCCGCCGTCATGGAGTCCAGCGGCTTTGAGGGGACGTATTCTGGCCAGTGGTGGGAAAAGCTCAAGCACGGGACGGCGGTCTATGGCGTGTTCTGGGACCCGCAGAAAGAGAACGGGCTGGGGGACATCGAGATCCGGGGGATCGACCTGCTCAACATCTTCTGGGAGCCTGGGGTGCAGGACATCCAGCAGAGCCGAAACCTCTTTATCGCCCAGCTGGTGGATGTGGATGCTCTGGAGGAGCAGTATCCCCAGTATGCGGGAAAGCTCCTGGGCGGGGCGCTGGACATCAAACAGTATGTGTACGATGACGCGGTGGACACCACGGACAAGGCGGTCGTGGTGGACTGGTATTACAAGCGCCGGACCATCTCCGGCAAGACGGTGCTGCACTACGCCAAGTTCTGCGGGGACTGTCTGCTGTACGCCTCCGAGAACGAGGGGCGGTATCAGGAGAGCGGGTGGTATGCCGATGGGCGCTATCCCGTGGTGATGGATACCCTCTACCCGGAAAAGGGGACCCCGGCGGGCTTTGGCCTGGTGGGGATCTGCAAGGATCCGCAGCTCTATATCGACCGGCTGTTTGGCAATATCCTGGAGTACAGCCTCCGGGCCAGCAAGCCGAGGGTCTTTGCCAGCGAGAGCGCGGGGATCAACGAGCGGGAGTTTCTGGATTGGAACAAGAGCGTCATCCACGTGGAGGGCAACATCGACCCAAGCAAGCTCCAGCAGATGACCATGGACCCGCTGCCCAGCATCTATGCCAACATCCTCCAGCTCAAGATCGAGGAGATGAAGGACACAGCGGCAAACCGGGACGTCAACTCCGGCGGGACGAGCTCCTCTGTCACGGCGGCGGCGGCCATCTCCGCCCTCCAGGAGGCGGGAAACAAGAGCTCCCGGGATATGATCGCGGCCAGCTATCGGGCACACAACGAGATCACGGACATGGTCATCGAGCGGATGCGGCAGTTTTATGACGTGGCGCGGGCCTTCCGCGTGGTGGGGCCCAACGGGACGGACGCGCGGTTCGTGGACTTTTCCAACGCAGGGCTGACTCCCCAGCCGGTGGGGATGGACAGCATGGGGCAGATGCTATTCCGGGAGCCGGTGTTTGACCTCAAGATCAAGGCCCAGAAGCGCAATCCCTTCTCCCGGATGGAGCAGAATCAGCGGGCGCTGGAGCTCTATTCCGCCGGATTTTTTGCCCCGGAAAACGCCCAGGCGGCCATGGGCGCACTGAACATGATGGACTTTGAGGGCAAGGAGGATGTCCGGGACTATGTGGCCCAGGGACAGACCCTACTCAACGTGGTGCAGCAGCTCACCCAGCAGGTGCAGATGCTGGCCGCGCAGATGTCGGCCCGGGTGGGCGTGGATATGGCCGCGCAGAACGCCCAGGAAGGGCAGAACCGGCAGGGCGGTGTGAAGGGTCAGACGCTGGACGAAAAGGCCAGCCAGAGCCAGGAAAGCAACCTCACGGGATACCAGCAGAAGCTGGCCGCCAGATCCGGCCCGAACATGAATGCAGGGAACCCCGCATGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0016787 hydrolase activity Molecular Function IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
9056c6ca6ee88e6d851540eced12e415f3c1861131725ef61a566d08d2580f76
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7772
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50