Protein

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Genbank accession
QHJ73615.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSQQSGFFDAIETSDGVFDREYLSADYCDNLATVIKNGVRYSNDNDLEVTAAGTMALNVAAGRAWIDGHYYYNDTPYTGLTISTAPVGNFKRIDRVVLRLDTSIAVRSIYLAIVEGTAASEPIAPPLTRTGTIYELCLATVTVPAGATAITAEMITDTRGNNGVCGWAASVSPAIMSLLKQYTYNTTLTGTVNTVAFDIPQYRPDEPCILDVYTNGVLEIRGTDYTVSGTSIIFTQNKVAGTEITVVVQKSIDGEGLASVADEITQIQNTIATLQSDNEYVYNCNGATDNVEISALAQAFLNGGTDYATMKIRVVGGNIGVTNAASGDGSALRHYKWFNIGQTASTNRRVIIDFSNAGQISIPITAGTYNDIFCGNDCYIIGANVSANQTGSNTQILMFADSTGAIRAENCRFWINASLNSYIANNGTFVNCRGSVSVTGENAYCFAPSAATLIRIDGGEYYAYCGGQSLISAVLYCTTAGACGIAYGVNCPSVSRSGFYQKYAIYATGGAVSITDTITTLTVNAPAANIRGTLAVNKTGLM
Physico‐chemical
properties
protein length:542 AA
molecular weight: 57395,58260 Da
isoelectric point:4,60961
aromaticity:0,09041
hydropathy:0,08450

Domains

Domains [InterPro]
DC_1002
STR
1–357
DC_1002
Coil
Unmapped
257–277
Coil
QHJ73615.1
1 542
Architecture
STR
STR 1-357 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHJ73615.1
1 542
Domain Start End Length (AA) Confidence
N-terminal 1 277 277 0,9608
Central domain 278 531 255 0,9875
C-terminal 532 542 10 0,1621
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-277
Central
278-531
C-terminal
532-542

Taxonomy

  Name Taxonomy ID Lineage
Phage Butyrivibrio virus Arian
[NCBI] 		2696357 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Butyrivibrio fibrisolvens DSM 3071
[NCBI] 		1121131 Bacillota > Clostridia > Lachnospirales > Lachnospiraceae > Butyrivibrio > Butyrivibrio fibrisolvens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHJ73615.1 [NCBI]
Genbank nucleotide accession
MN882551 [NCBI]
CDS location
range 12771 -> 14399
strand +
CDS
ATGTCACAGCAAAGCGGTTTTTTTGATGCAATAGAAACAAGCGACGGGGTTTTTGACCGTGAGTATTTAAGCGCCGATTATTGCGATAATTTGGCAACCGTTATAAAAAACGGTGTAAGATATTCAAATGATAATGATTTGGAAGTAACAGCAGCGGGCACAATGGCGTTAAACGTTGCGGCGGGGCGTGCATGGATTGACGGACATTATTACTACAATGACACACCGTATACAGGTTTAACAATATCAACCGCCCCGGTGGGTAATTTTAAACGTATTGACCGCGTTGTTTTGCGACTTGATACATCTATTGCGGTTCGTTCTATTTACCTTGCAATAGTTGAGGGAACAGCCGCAAGTGAGCCAATAGCGCCGCCGTTGACTAGGACGGGCACCATTTACGAATTATGTTTAGCAACCGTTACAGTTCCCGCAGGTGCAACAGCTATAACAGCCGAAATGATAACAGACACGCGCGGAAATAACGGCGTTTGTGGATGGGCGGCGAGTGTTTCACCCGCTATAATGTCATTATTAAAGCAATACACATATAATACAACATTGACCGGAACGGTTAACACGGTTGCGTTTGATATTCCGCAATACAGACCGGACGAACCGTGTATTTTAGACGTGTATACAAACGGTGTTTTAGAGATCAGGGGAACAGATTACACCGTATCAGGAACAAGCATTATTTTTACACAAAACAAAGTTGCGGGAACTGAAATTACAGTTGTTGTGCAAAAATCAATAGACGGCGAGGGTTTGGCAAGCGTAGCGGACGAAATAACCCAAATTCAAAACACAATTGCAACGCTGCAAAGTGATAATGAATATGTATACAATTGCAACGGCGCAACCGACAATGTTGAAATTTCAGCATTAGCACAAGCATTTTTAAACGGCGGCACTGATTACGCCACTATGAAAATTCGCGTTGTTGGCGGCAATATTGGCGTTACAAATGCAGCAAGCGGCGACGGTTCCGCGTTAAGACATTATAAATGGTTTAATATAGGGCAAACCGCAAGCACTAACAGACGTGTTATTATTGATTTTTCCAACGCGGGACAGATCAGCATACCAATTACAGCAGGTACATACAACGATATTTTTTGTGGAAACGATTGTTATATTATCGGCGCTAATGTTTCAGCAAATCAGACGGGTTCAAATACTCAAATTTTAATGTTTGCAGATTCCACCGGAGCAATCAGGGCGGAAAACTGCAGATTTTGGATTAACGCAAGTTTAAATAGTTATATAGCAAATAACGGCACATTTGTTAATTGTCGCGGTTCCGTGTCAGTAACGGGCGAAAATGCGTATTGTTTCGCGCCGAGTGCAGCAACGTTAATACGAATTGACGGCGGCGAATATTACGCATATTGCGGCGGTCAATCGTTAATTTCGGCGGTTTTGTATTGCACAACGGCGGGAGCGTGTGGCATTGCATACGGCGTAAATTGTCCGAGTGTTTCACGTAGCGGCTTTTATCAAAAATATGCCATTTACGCCACGGGCGGCGCGGTTAGCATTACGGACACAATAACCACATTAACGGTTAATGCGCCCGCCGCAAATATACGCGGAACATTGGCAGTTAATAAAACGGGTTTAATGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cbd70929a46e533968f8896d676f069358e63285407a346e759029ced01c9e8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7807
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequencing of Six Novel Lytic Bacteriophages from the Rumen Active Against Butyrivibrio fibrisolvens Friedersdorff,J.C.A., Kingston-Smith,A.H., Pachebat,J.A., Rooke,D. and Creevey,C.J. 2020-07-14 — GenBank