Protein

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UniProt accession
A0A8S5MXE1 [UniProt]
Protein name
PROTEIN (TUMOR NECROSIS FACTOR ALPHA), CYTOKINE, CYTOTOXIN, TRANSMEMBRANE, GLYCOPROTEIN.4A
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MVRPSLLLDTAPRNGGGRNNNNVVVQQSSVSWTYGKITGTSATDSTLPSGWVEVGIPYSNPTSHAVGESDGIATWIGARVLVIIDSSGRVVKISDPIAEPPSGAKVENLGHTGKILSQAAKDAERAFKEADAIRDRANKAEGAANKAAKDAEKAVQIAEANRPPVVARTAPENPVTGLIWYVIDNAGHITDVRIWDGTQWVTRTMVAGSILVPSSVGNVSLADGSVSARNIYASGELWAKIAAFASVTTEMLTAGNATFNAAKVTGDLIGNRLIGGELSLVDTEPTSGEKNIRFGLGSEYGFWESIWSPKIATVEELEGGTRFVLTDRDRPNRNDGAQMAIYDIAVAKPKTYGIAGEGVGKVEGYILFTPSWNGRAILTINIGKNRIISVDEQATAGQKIRFDFTLPDGAWIQDTDTPFYISARTNDVFTPGMQLGIIYSMYVSWKMSRSSGLHIFRDDEGVAKIQVTDRQGGQLVMDTNGVSYDPPGSPTPHSSSWRTFTEPPFAHMATNNAHLWTVKDKWTKVPVGSQEKIVRGGMQVDGIEIIIPQSGLYRLDGTTWYRSSWAGYVGGTKVSRSNDDEYGVYMYAALNHGLWTALQVTGVRRLNVGDRIALYTYQNIDEGTIMDWGEMTVSWLTY
Physico‐chemical
properties
protein length:638 AA
molecular weight: 69125,81880 Da
isoelectric point:5,66249
aromaticity:0,08621
hydropathy:-0,24185

Domains

Domains [InterPro]
DC_1951
STR
10–315
DC_1951 DC_0486
Coil
Unmapped
120–140
Coil
A0A8S5MXE1
1 638
Architecture
STR
RBD
STR 10-315 | RBD 484-638
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctio73
[NCBI] 		2826435 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD86876.1 [NCBI]
Genbank nucleotide accession
BK015009 [NCBI]
CDS location
range 6484 -> 8400
strand +
CDS
ATGGTCAGACCGTCACTATTGCTTGACACGGCGCCACGAAACGGTGGCGGCCGCAACAATAACAATGTTGTTGTTCAGCAATCCTCAGTATCGTGGACGTACGGGAAAATCACCGGCACGTCCGCCACCGACAGTACGCTCCCGTCCGGCTGGGTGGAAGTAGGAATCCCCTACAGTAACCCGACCTCTCATGCTGTTGGCGAATCCGATGGTATTGCCACGTGGATAGGTGCCCGCGTACTCGTCATCATTGACTCATCCGGCCGCGTAGTCAAAATTAGTGACCCTATCGCTGAGCCGCCTTCCGGTGCGAAGGTTGAGAATCTCGGGCACACGGGCAAAATTCTCAGCCAGGCCGCGAAAGATGCCGAACGCGCCTTCAAAGAGGCCGACGCGATTCGAGACCGGGCCAACAAGGCCGAAGGTGCTGCGAACAAGGCGGCGAAAGACGCGGAAAAAGCTGTTCAGATTGCGGAAGCTAACCGTCCGCCCGTAGTGGCCCGGACCGCACCAGAGAATCCTGTCACAGGGTTGATTTGGTATGTCATCGACAATGCCGGGCACATTACTGACGTGCGTATTTGGGACGGCACACAGTGGGTGACCAGGACAATGGTCGCTGGCAGCATTCTCGTCCCCTCGTCCGTGGGAAACGTCTCGCTCGCTGACGGCTCTGTGTCCGCACGCAACATTTATGCGTCCGGGGAACTCTGGGCGAAAATCGCGGCGTTCGCGTCTGTTACTACGGAAATGCTGACCGCAGGAAACGCGACATTCAACGCAGCCAAGGTCACCGGCGACCTCATCGGCAATAGGCTTATCGGTGGTGAGCTTTCGCTCGTTGATACTGAGCCGACGTCAGGCGAGAAGAATATCCGATTCGGCCTCGGCAGCGAATACGGGTTCTGGGAGTCTATTTGGTCTCCCAAAATCGCGACCGTAGAGGAGCTCGAGGGCGGCACGCGATTCGTTCTGACGGACAGAGACCGTCCTAATCGCAACGATGGCGCGCAGATGGCAATCTACGACATTGCTGTTGCGAAACCAAAAACATACGGTATCGCCGGTGAGGGTGTCGGCAAGGTTGAGGGGTATATTCTTTTCACCCCGTCATGGAACGGCCGCGCAATTCTCACAATCAACATTGGCAAGAATAGGATCATCAGTGTTGACGAGCAGGCGACAGCCGGGCAGAAAATAAGATTCGATTTCACGCTCCCCGACGGCGCGTGGATCCAAGACACGGACACGCCTTTCTACATTAGTGCCCGCACGAACGATGTTTTCACGCCAGGGATGCAGCTCGGAATCATTTATTCCATGTACGTGTCATGGAAGATGAGCCGCTCCTCGGGTTTGCATATTTTCCGTGATGACGAGGGCGTGGCGAAAATACAGGTCACTGATCGTCAGGGCGGCCAGCTCGTCATGGACACGAATGGCGTGTCCTATGATCCGCCCGGATCGCCCACGCCTCATTCTTCGTCTTGGCGTACTTTCACGGAGCCGCCTTTTGCCCACATGGCAACAAACAACGCGCACCTGTGGACTGTGAAGGACAAATGGACCAAGGTCCCGGTCGGTTCGCAGGAGAAAATTGTTCGTGGCGGAATGCAGGTAGACGGTATCGAGATCATTATTCCGCAGAGCGGTCTTTATCGTCTAGACGGTACAACATGGTACAGGTCATCATGGGCGGGATACGTTGGCGGCACGAAGGTTTCTCGCAGCAACGATGATGAATATGGCGTTTACATGTACGCCGCGTTGAACCATGGCCTGTGGACTGCGTTGCAGGTGACCGGTGTCAGGCGTTTGAACGTCGGGGACCGGATCGCGCTTTATACGTATCAGAATATTGATGAGGGTACAATTATGGATTGGGGCGAGATGACGGTTAGCTGGCTCACCTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d399d66fb80e1dfa52b362d851c46b65924f28e9e620206191bc72169c023788
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7309
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50