Protein

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Genbank accession
YP_004323643.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYIIDNRPGEVLYTNVPPIDENSNLDLTSPNNVLHKYNSVEGGVIVPRGCSLVGTDLRRTKIIPKYIPYPTVYAAKGINTEDQVPSRTAIFKVTGGTYFWQFSFFDGAKKVYTSNLIVQKRFLQSSLIIELLVSSLQMV
Physico‐chemical
properties
protein length:215 AA
molecular weight: 24235,40130 Da
isoelectric point:8,90381
aromaticity:0,11163
hydropathy:-0,11767

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage Syn33
[NCBI] 		444878 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus syn33
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323643.1 [NCBI]
Genbank nucleotide accession
NC_015285.1 [NCBI]
CDS location
range 22772 -> 23419
strand +
CDS
ATGTCTCTAACTAGACTTAAGAATATTATTACTTCGAGGACAGGGCGTATTATTTACGTCAACCCCGATGATTTTGATGCTTCTGATGCTATCGATAACAGGGGTAACTCTGCATTGAGACCCTTCAAGTCTATTCAGAGAGCATTTCTAGAGGTTGCTAGATTTTCGTATCGAGTAGGTTTGTCGAACGACGAATTTGACGCCTTCTCGATCATGCTGTATCCAGCAGAATATATCATTGACAATCGTCCAGGTGAAGTATTATATACGAATGTTCCTCCTATTGATGAGAACTCCAATCTTGATTTAACATCACCTAACAATGTGTTGCATAAGTACAACTCTGTTGAAGGTGGAGTTATCGTTCCTAGAGGTTGTTCTCTTGTAGGTACTGACCTTCGTCGTACAAAAATTATTCCTAAGTATATTCCATATCCTACAGTGTATGCTGCAAAGGGTATTAATACAGAAGATCAAGTACCTTCTAGAACAGCAATCTTTAAGGTGACTGGTGGTACATATTTCTGGCAGTTCTCATTCTTTGATGGTGCTAAGAAGGTGTATACTTCAAACCTGATAGTACAGAAACGCTTTCTCCAAAGTTCTCTCATCATAGAATTACTTGTTTCGAGTTTGCAGATGGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
345e3f04fae2abfa9e463ad96731c1c85710e04dd873a6cb554d46994b940afd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6172
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn33 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank