Protein

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Genbank accession
USL87072.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDEADNIVQLAGKGVPFLDTSGTLSVDGTTTLKDNVTISPNKAINFEASDLSGALVRHITGKCANNDGWYIGAGGASDQGFLEIGTYDNGNEPIYFVQRTGGSAQTEVRRLALLDGFGDTSIPGDLRLTDKTVKISNGSTLTLEMGVGSNDAYIKNLRGTGVLQLTNDSNLTFRNSQVYYAMNGRGPGKSGTLLTNVENNRQAWQYVISAATAATPRWVKVATIKHPGEASSQLDLMITGGIDSGHGRHYVDFITLSGRNLTSWSTNNLDNWVEWRRIGSPNKGNVPEYYVVKNDAATNSEASFDFYAKVPRYGNGLYVTVLNTAGYNGQDSGKVIIYETGQDTGATAPSGSILVSMKQIFDSIAKPDFSYTTGTLPVNRGGTGATNVGDARNNLGLGTAAVRDVGESSGNVMEVGAFGVGGNGKSLVNITSDVDLMTRLKALGGTVFRANTASGYTGAPYYSHGTGFYGRASDTMAALNIDYATGNVRVFAINDSGLASGRVNSNVLYGTANKPSKADVGLGNLTNDTQVKKAGDTMTGDLTVPNLHASGPGTASVYVNAGSGNAHVWFRTNANERGVIWATPNTADLGQINIRAKTTGGTSAGDYSFRSDGRLDVPVAVKVGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDIVAGDNKQVSKTGDTMTGNLTINANLKVENPSGTFVDLGSENSDKYSRLTLARKVGSGATVAMLKVTPEGYVQFGYQDAVATPAPTKYILVKSNGLEVEGDLVFNQTYRGTEDAVDISDKTIDLNSLIIKRTDPGTRRLYKCVSSGGGNNISNKPTSGGNFVLEVLSLRKVSDTDWSCKQTFTTKNGNVEGVYVRYGQNGSWAAWREVVAGVQPINLGGTGATSVAAARNNLGVGEGQTVSFGNLVTNDLTANGNARLVGRLNLGSTSATGVLRANETGAVVLGSASGQNIHIRAGSPDTSSGETRFEPNGNVLVGGVLTSSGSLQVNGEATMGRSLIVSQNIKNTNDNSFILMGKDSDLGFVKKSGAGSKLVFASGKTFTVAKSSATAISNPASETYTDVFKVDADGNQTVYGNAQVNRQLTVSSSATVNGIINANSGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGPLNITGNQLKTTSLWVTGNSALNGNLEVGGNVVSNTGIGSFVGAVDVKAPAVDNGTTHLWFRHSNGGERGVIYMPGNNNTMMGLRAGGSEWQLDGPTGQMIGPGARWRIHADGNLQGDVYGGYITNYINDRFNQCAQWVRTGAQQDFGPIGRPAPGKTVPGGWVLVGLNGNSNETNQNMQLIGGRLQVWKPGVQWVDSAT
Physico‐chemical
properties
protein length:1390 AA
molecular weight: 145730,04320 Da
isoelectric point:8,48941
aromaticity:0,06978
hydropathy:-0,29964

Domains

Domains [InterPro]
DC_1942
ATT
4–620
DC_1942 cd19958 DC_0238
DC_0468
STR
484–1048
DC_0468
USL87072.1
1 1390
Architecture
ATT
STR
RBD
ATT 4-620 | STR 621-1048 | RBD 1049-1344 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USL87072.1
1 1390
Domain Start End Length (AA) Confidence
N-terminal 1 1055 1055 0,1444
Central domain 1056 1254 200 0,3641
C-terminal 1255 1390 135 0,9015
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1055
Central
1056-1254
C-terminal
1255-1390

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PSE-D1
[NCBI] 		2951242 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USL87072.1 [NCBI]
Genbank nucleotide accession
ON550260.1 [NCBI]
CDS location
range 154196 -> 158368
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCTTTGAATACACATGGGCGTACTCTCGCTATCTATACCAAAGATGAAGCTGATAATATTGTTCAGCTTGCTGGTAAAGGGGTTCCTTTCTTAGATACCTCCGGAACTCTTAGCGTTGATGGAACTACTACATTAAAAGACAACGTAACCATTTCTCCGAATAAAGCGATCAATTTTGAAGCTTCTGATTTAAGTGGAGCATTAGTACGTCATATCACCGGTAAGTGTGCTAATAATGATGGCTGGTACATTGGAGCTGGCGGCGCATCTGACCAGGGATTTCTTGAAATTGGTACGTATGATAACGGAAACGAACCTATCTATTTTGTTCAAAGGACTGGTGGATCGGCGCAAACCGAAGTTCGTCGTTTAGCATTATTAGATGGGTTTGGCGATACTTCTATACCTGGGGACCTTCGTTTAACTGATAAAACAGTAAAAATTTCAAACGGCAGCACTCTTACTTTGGAAATGGGTGTAGGTTCTAATGACGCATACATTAAAAACCTGAGAGGAACCGGTGTTCTTCAATTAACCAATGACAGTAATCTGACATTCAGAAATTCACAGGTATATTACGCCATGAACGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACAAATGTAGAAAACAATCGTCAGGCATGGCAATACGTAATTTCTGCTGCAACTGCTGCAACTCCGCGTTGGGTTAAAGTAGCTACAATTAAACATCCAGGAGAGGCGTCTTCACAGTTAGATTTAATGATTACTGGTGGCATTGATTCTGGGCACGGAAGACATTATGTTGATTTTATCACGTTATCTGGTCGCAATTTAACGTCCTGGAGCACCAACAATTTAGATAACTGGGTTGAATGGCGCAGGATTGGTTCTCCTAATAAAGGAAACGTTCCAGAATATTACGTTGTTAAAAATGATGCTGCTACAAATTCAGAGGCTTCGTTTGATTTTTACGCTAAAGTTCCTCGATATGGCAATGGCCTTTATGTTACAGTGCTAAACACGGCTGGATACAACGGTCAAGACAGCGGTAAAGTAATTATCTACGAAACTGGCCAAGATACTGGTGCTACTGCACCATCTGGAAGCATTCTTGTTTCAATGAAACAGATTTTCGATAGTATCGCAAAACCAGATTTCAGTTATACTACCGGTACTCTTCCGGTTAACCGCGGTGGTACAGGTGCTACTAATGTAGGAGATGCCAGAAACAACTTAGGTTTAGGTACTGCTGCTGTTCGCGATGTTGGTGAATCCAGCGGAAACGTGATGGAAGTTGGTGCATTTGGTGTCGGTGGTAACGGAAAATCACTGGTAAATATTACGTCTGACGTTGATTTAATGACTCGCCTTAAGGCTCTTGGTGGTACAGTATTCAGAGCCAACACAGCAAGTGGTTATACAGGGGCTCCTTATTACTCCCATGGCACCGGATTTTACGGAAGAGCTTCTGACACAATGGCTGCGCTTAATATAGATTATGCAACTGGTAACGTCAGAGTATTTGCTATAAACGATAGTGGTTTAGCAAGTGGAAGAGTAAATTCTAATGTTCTCTACGGCACAGCAAACAAACCATCTAAGGCTGATGTCGGACTTGGTAATCTGACAAACGATACCCAAGTCAAGAAAGCTGGCGACACCATGACTGGTGATTTAACTGTTCCTAATTTACATGCTTCCGGCCCGGGTACTGCATCAGTATATGTTAATGCAGGAAGCGGAAATGCTCATGTATGGTTTAGAACAAACGCCAATGAACGCGGTGTAATTTGGGCGACGCCTAATACTGCTGACTTAGGACAAATTAATATTCGCGCAAAAACTACTGGAGGTACTTCTGCTGGTGATTATAGTTTCCGTTCTGATGGTCGTCTTGATGTTCCTGTAGCAGTTAAAGTTGGTGGAGCAGCAATGCTAACCAAAGACGGGAATATTACCTCTGGTTCGATGTTTGGTGGTAACCTTAACAACTATTTGACTTCTATTAAAAACGATATCGTTGCTGGCGATAATAAGCAAGTAAGCAAGACTGGTGATACCATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTCGAAAATCCTAGTGGAACATTTGTTGATTTAGGTTCAGAGAACTCAGACAAGTACAGCAGATTAACCCTTGCACGTAAAGTTGGTAGCGGTGCTACCGTAGCAATGCTTAAAGTTACCCCTGAAGGATACGTGCAATTTGGTTATCAAGATGCAGTTGCTACTCCAGCTCCTACCAAGTACATCCTGGTTAAATCTAACGGCCTTGAGGTAGAAGGGGATTTAGTTTTTAATCAGACCTATCGCGGCACTGAAGATGCAGTTGATATTTCTGATAAAACTATTGACCTTAATAGTCTTATCATTAAAAGAACCGACCCTGGTACTCGTCGGTTGTATAAATGTGTATCATCTGGTGGCGGAAACAATATATCGAACAAACCTACCTCTGGTGGAAACTTTGTTCTTGAAGTTCTGTCTTTACGCAAGGTTTCTGATACCGATTGGTCATGTAAGCAGACCTTTACTACAAAGAACGGTAATGTTGAAGGCGTATATGTTCGATACGGGCAAAACGGTTCATGGGCTGCATGGAGAGAGGTTGTTGCAGGGGTTCAACCAATCAACTTGGGCGGTACCGGAGCAACTTCTGTGGCTGCTGCTCGTAATAACCTCGGTGTTGGTGAAGGACAAACAGTATCATTCGGTAATTTAGTTACAAACGATTTAACTGCAAACGGAAACGCTAGATTAGTTGGAAGACTGAACCTTGGTTCTACTTCTGCGACTGGCGTATTACGAGCTAATGAAACTGGTGCGGTTGTCTTAGGTTCTGCTAGTGGTCAAAACATCCACATCAGAGCAGGAAGCCCAGATACTTCTTCTGGTGAAACCCGCTTTGAGCCAAATGGAAACGTTTTAGTTGGTGGAGTTCTGACGTCTTCAGGAAGCTTGCAAGTAAATGGCGAAGCCACGATGGGCAGAAGCTTGATCGTTTCTCAAAACATAAAGAATACTAACGATAATAGTTTTATTCTGATGGGAAAAGATTCGGATTTAGGTTTCGTTAAAAAATCTGGTGCAGGTTCTAAACTGGTCTTTGCTTCAGGAAAAACATTTACTGTTGCTAAATCATCAGCAACTGCTATAAGTAATCCGGCTTCAGAGACTTATACTGATGTGTTTAAAGTTGATGCAGACGGAAACCAAACCGTTTACGGAAATGCCCAAGTTAATAGACAGTTAACTGTTTCTAGTTCAGCAACTGTTAATGGTATTATTAATGCCAACAGCGGTATTATTGTTCCTACTACCAAGTATGTGCAAATTGCCGATGCTCCTACGCAGAATAACCAAGCCACCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAATGCTGGCGATACTTATCTTCCATTAGCAGGTGGTACTGTAACTGGTCCATTAAATATTACTGGAAACCAGTTAAAAACCACATCGCTCTGGGTTACTGGAAATTCGGCACTTAACGGTAATTTAGAAGTAGGCGGTAATGTTGTTAGTAATACTGGTATTGGTAGTTTTGTTGGTGCTGTAGATGTTAAGGCCCCTGCCGTAGATAATGGTACAACGCACCTTTGGTTCCGACATTCTAATGGTGGCGAGCGTGGTGTGATTTACATGCCAGGTAACAATAATACCATGATGGGATTAAGAGCTGGCGGTAGTGAGTGGCAATTGGATGGTCCGACAGGTCAAATGATAGGCCCAGGTGCTCGTTGGCGTATTCACGCAGATGGTAACCTACAGGGTGATGTTTACGGTGGTTATATCACTAACTATATCAACGATAGGTTTAACCAATGTGCACAGTGGGTTCGTACTGGTGCTCAACAAGACTTTGGTCCAATTGGTCGTCCAGCACCTGGTAAAACTGTTCCTGGTGGTTGGGTGCTTGTTGGTCTTAACGGTAACAGTAACGAAACTAACCAGAATATGCAACTTATCGGTGGACGTTTACAAGTATGGAAACCGGGCGTTCAATGGGTTGATTCTGCTACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9acb0dc1171c964969e0e9d6c4cf0f5b50b9cca917635c4696a1a86bc4cad733
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50