Protein

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Genbank accession
AIK68612.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,69
Protein sequence
MTIKYFTFFSPNNTEFPVGSNNDAKLYMMLTGMDYGTIRRKDWSAPVNTALNVQYTNTSIIAGGRYFELVGETIPLKANSVNYIHANIDLTQTTSPVKLSAETLNNSNRTDINNSSGVLKVLIDIRTTNGLGVISSEIPKQITTLDELATKTANIEDLTVKGDIKGWTSVSMQNVASATLQYKKINGAICLRGSGNWGAFKANSTKVVGSLPPEVRPTDNTQFEMTTQRANNNNKPMELQIDTNGTINVWSYSAGSGNYGGVVGTYFQ
Physico‐chemical
properties
protein length:268 AA
molecular weight: 29219,50160 Da
isoelectric point:8,51152
aromaticity:0,08209
hydropathy:-0,32687

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–139
G3DSA:2.60.520.10
G3DSA:2.60.520.10
STR
1–135
G3DSA:2.60.520.10 DC_0707
IPR048780
RBD
2–137
IPR048780
SSF141658
STR
2–139
SSF141658
AIK68612.1
1 268
Architecture
STR
RBD
STR 1-139 | RBD 140-268
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage phi93
[NCBI] 		1527694 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus sp. 936
[NCBI] 		39838 Uroviricota > Caudoviricetes > Skunavirus > Skunavirus sv936

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIK68612.1 [NCBI]
Genbank nucleotide accession
KM091443 [NCBI]
CDS location
range 17558 -> 18364
strand +
CDS
ATGACAATTAAATACTTTACATTCTTTAGTCCAAACAATACAGAGTTTCCAGTCGGTTCTAATAATGACGCAAAGTTATATATGATGTTGACTGGAATGGACTATGGAACAATCAGGCGCAAAGATTGGTCAGCGCCAGTAAACACAGCCCTAAATGTACAATATACCAATACTTCAATTATTGCTGGAGGTAGATATTTTGAACTAGTGGGTGAGACGATACCTCTAAAGGCTAATTCTGTCAATTATATCCATGCAAATATTGACTTAACTCAAACTACTAGTCCTGTAAAGTTATCAGCTGAAACCTTAAACAATAGCAACAGAACCGATATAAATAATAGTTCTGGTGTCCTAAAGGTTTTGATTGATATCAGAACGACTAATGGTTTAGGGGTAATCAGTTCTGAAATACCAAAACAAATAACTACATTGGACGAATTAGCAACAAAGACAGCTAATATTGAAGACTTGACAGTCAAAGGAGATATCAAGGGCTGGACTAGCGTTTCAATGCAAAACGTAGCTAGTGCAACTCTTCAATATAAAAAAATTAACGGTGCCATTTGTTTACGTGGTTCAGGAAACTGGGGTGCCTTTAAAGCAAATTCTACAAAAGTTGTCGGAAGTTTGCCACCAGAAGTAAGACCAACTGATAACACTCAATTTGAAATGACAACACAACGTGCAAATAACAACAATAAACCAATGGAACTACAAATAGATACTAACGGTACGATAAACGTATGGAGTTACTCTGCTGGTTCAGGTAACTATGGCGGTGTCGTAGGGACATATTTCCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e7b4bce7b72b2b7f39105ad94e1b57c355c35ae1cc6409a9205634f15d2cd3ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7552
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Methyltransferases acquired by lactococcal 936-type phage provide protection against restriction endonuclease activity Murphy,J., Klumpp,J., Mahony,J., O'Connell-Motherway,M., Nauta,A. and van Sinderen,D. 2014 25269955 GenBank