Protein

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Genbank accession
QRD99845.1 [GenBank]
Protein name
preneck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSTKPELKRFEQFGEMMVQLYERYLPTAFDESLTLLEKMNKIIHYLNEIGKVTNELIEEWNKVMEWILNDGLEDLVKETLERWYKEGKFADLVIQVIDELKQFGVSVKTYGAKGDGVTDDTKAFEKAIESGFPVYVPYGIFMVSRGIKLPDNTVLTGAGKRNAVIKFMDSVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLTIRAGRNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENVWIENCEATGFGDDGITTHHSQYINILSCYSHDPRLTANCNGFEIDDGSRHVVMSNNRSKGCYGGIEIKAHGDAPAAYNISVNGHMSVEDVRSYNFRHIGHHAATDPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGSRGGDAVNISNVTLNNSGRYGVSIGSGIENVSITNISGIGDGINSPVALVSTINSNPEISGLSSIGYPTVARVAGTDYNDGLTLFNGAFRASTTSSGKIHSEGFIMGSTSGCEASVSKSGVLTSSSSKTSSERSLIAGSSTSEAKGTYNTILGSLGAVADEQFAALISASQSRASGNHNLILSSYGINTTGSYKVNGGFEKINWELDSLNGRIKARDTVTGGNTWSDFAEYFESLDGQVIETGYLVTLEKGKIRKAEKGEKIIGVISETAGFVLGESSFEWQGAVLKNEFGGIVYEEVTTEDGVKFKRPLPNPDFDPNKNYIPRSQRREWHVVGLLGQIAVRIDETVKQGHGIDAVGGVATDGDNFIVQEITTPYTKEKGYGVAIVLVK
Physico‐chemical
properties
protein length:854 AA
molecular weight: 92148,78760 Da
isoelectric point:5,24979
aromaticity:0,08197
hydropathy:-0,25562

Domains

Domains [InterPro]
IPR012334
STR
84–551
IPR012334 G3DSA:2.160.10.20:FF:000001 G3DSA:2.40.300.10
IPR011050
STR
103–421
IPR011050 IPR006626 IPR006626 G3DSA:2.160.10.20 G3DSA:4.10.80.40
IPR024535
ENZ
105–333
IPR024535 DC_1692 IPR021865
IPR006626
Unmapped
224–246
IPR006626 IPR006626 IPR006626 IPR006626
QRD99845.1
1 854
Architecture
STR
RBD
STR
RBD
STR 84-551 | RBD 552-579 | STR 580-631 | RBD 632-854
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QRD99845.1
1 854
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,9894
Central domain 121 659 540 0,9580
C-terminal 660 854 194 0,8786
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-659
C-terminal
660-854

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage BSTP6
[NCBI] 		2801531 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QRD99845.1 [NCBI]
Genbank nucleotide accession
MW354670 [NCBI]
CDS location
range 11402 -> 13966
strand +
CDS
ATGTCAACTAAACCCGAATTGAAACGGTTTGAGCAGTTTGGAGAGATGATGGTTCAGCTATATGAACGGTATCTACCAACCGCCTTTGATGAAAGTTTAACATTATTGGAGAAAATGAACAAGATCATCCATTACTTGAATGAGATTGGCAAAGTAACAAATGAGCTAATCGAAGAATGGAACAAGGTAATGGAGTGGATTCTCAACGACGGGTTAGAAGACTTAGTCAAAGAGACGCTCGAAAGATGGTATAAAGAAGGTAAATTCGCTGACCTCGTTATCCAAGTAATCGACGAATTGAAGCAGTTTGGTGTTAGCGTTAAGACCTACGGGGCAAAGGGCGACGGTGTCACTGATGATACAAAAGCCTTTGAAAAGGCTATAGAATCGGGTTTCCCTGTATATGTACCATATGGTATATTCATGGTTTCACGTGGAATTAAGCTACCTGATAACACCGTGTTAACAGGGGCAGGGAAGCGCAATGCTGTCATCAAATTTATGGATAGTGTTGGACGTGGAGAAAGCCTCATGTACAATGAAAACGTAACAACTGGAAATGAAAATATTTTCTTATCTTCTTTCACCCTTGACGGTAACAATAAGCGTTTAGGACAAGGCATCTCTGGTATTGGCGGTTCACGTGAAAGTAACCTTACCATCAGAGCAGGACGTAATGTTTATATCCGTGATATTGAGGCTGTTGATTGCACATTACATGGAATCGACATCACATGTGGTGGACTCGATTACCCTTACTTGGGTGACGGTACAACCGCCCCAAATCCATCAGAAAACGTCTGGATTGAAAATTGTGAGGCGACTGGGTTTGGTGATGATGGTATCACAACTCACCATAGTCAATACATCAATATCTTGAGTTGTTACTCACACGACCCTCGTTTAACAGCTAACTGTAACGGGTTTGAGATTGATGACGGTTCCCGTCACGTTGTGATGAGCAATAACCGTTCTAAAGGTTGTTACGGTGGGATCGAGATTAAAGCTCACGGGGATGCTCCGGCGGCTTATAACATCTCTGTGAACGGGCATATGTCTGTAGAAGACGTTCGGTCATATAACTTCCGACACATCGGACACCATGCGGCTACTGACCCGCAGTCTGTATCAGCTAAAAACATTGTTGCTTCGAATCTTGTATCTATTAGACCTAACAACAAACGTGGTTTCCAAGACAATGCTACACCAAGGGTTCTAGCTGTATCGGCATACTACGGGGTTGTAATCAACGGTTTAACAGGATACACAGATGACCCGAATTTATTAACTGAAACTGTTGTATCTGTTCAATTTAGGGCAAGAAACTGTTCCCTTAATGGTGTTGTTCTCACTGGATTCTCTAACTCTGAGAATGGAATCTATGTCATTGGCGGTAGCCGTGGTGGAGACGCCGTTAATATCAGTAACGTTACCCTTAATAACTCAGGTCGATATGGAGTATCAATCGGCTCAGGAATTGAAAACGTATCTATTACCAATATTAGCGGTATCGGTGACGGTATTAACTCTCCTGTAGCGCTCGTATCAACGATTAACAGTAACCCTGAGATTAGCGGATTAAGCAGTATTGGATACCCTACGGTTGCTAGGGTTGCTGGGACAGACTATAACGATGGTTTAACACTCTTTAATGGTGCGTTTCGTGCTTCCACAACATCTAGCGGCAAGATTCACAGTGAGGGCTTCATCATGGGTTCAACGTCAGGGTGTGAAGCATCTGTTTCAAAATCAGGTGTTCTAACGTCATCAAGCTCGAAGACTAGCTCTGAGCGTTCTCTCATAGCAGGTAGTTCAACATCTGAAGCCAAGGGAACATATAACACGATTTTAGGTTCACTGGGTGCGGTTGCTGATGAGCAGTTTGCGGCTTTAATTTCTGCGTCACAATCAAGAGCATCAGGAAACCACAACTTAATTCTATCAAGTTATGGAATTAATACAACAGGGTCATACAAAGTTAACGGTGGATTCGAAAAGATCAACTGGGAGCTAGATTCCTTAAACGGTAGAATTAAAGCTCGTGACACCGTAACAGGCGGAAACACATGGAGTGACTTTGCCGAGTATTTTGAGAGCTTAGACGGTCAAGTCATTGAAACAGGGTATCTGGTTACTCTTGAAAAAGGTAAAATCCGTAAAGCTGAAAAAGGTGAAAAGATCATCGGTGTTATCAGTGAAACAGCGGGGTTTGTCCTTGGTGAATCATCATTTGAATGGCAGGGAGCTGTCCTTAAAAACGAGTTTGGCGGCATCGTTTATGAGGAAGTCACAACAGAAGACGGCGTAAAATTCAAACGACCGCTTCCAAACCCTGACTTTGACCCTAATAAGAATTATATCCCACGTAGTCAACGTAGAGAATGGCATGTTGTTGGTTTACTGGGGCAGATCGCTGTTAGAATCGACGAAACAGTTAAACAAGGGCATGGTATTGATGCTGTTGGCGGTGTTGCTACAGACGGCGATAACTTTATTGTGCAAGAAATAACTACCCCGTATACAAAGGAAAAAGGATACGGTGTGGCGATCGTGTTAGTTAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
88e50706687ecb37e0d3118dfa9ad4d4b8c06ec25d1744dca748ce2170a2f870
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3239
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Bacillus phage BSTP6 Abraha,H.B. and Kim,K.-P. 2023-04-29 — GenBank