Protein

View in Explore
Genbank accession
WGL32444.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANVIKTVLTYPLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTINTDYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANSVDDRDAVPFGQLKTMNQNSWQARNEALQFRNEAETFRNQAEGFKNESGTNAANTKQWRDETNGFRDEAEQFKNTATQQATAASNSASAAHQSEVNSENSATASANSAHLAEQQADRAKTEADKLENNNAFAGTLDSITQPTPGALPGSGRVDFKDGFSVNAPVLRADKGAMSLGRKRVAGDGTTDTFINLYNGDTSLGAMKFTNDGNWHFTPAGDGVGKTVYIDADTLGVRSLYSGIHYSSLPQGGVLQLLRMMNPSGEINASNLAFSRYLFQGRGGNGSEVGAFCDSGIREVVGSTFEYFIHLAGFGTDWWWGFRNDGTLRVNNTIFNHDGNVHGNAWGGWLNQWLGANTVNHIAMSGVNWAQLWRAGGIEDGGGRVITGITNPNGDDLIDGCYWRVMQYVRNDGQRFNIY
Physico‐chemical
properties
protein length:554 AA
molecular weight: 60643,08160 Da
isoelectric point:5,47032
aromaticity:0,09567
hydropathy:-0,47617

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil Coil
DC_0264
STR
1–553
DC_0264
WGL32444.1
1 554
Architecture
ATT
STR
ATT 1-131 | STR 132-553 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PGX1
[NCBI] 		3038274 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGL32444.1 [NCBI]
Genbank nucleotide accession
OQ703770.1 [NCBI]
CDS location
range 31382 -> 33046
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCCGTTAGATGGCTCCAATCGTGATTTTAATATCCCGTTTGAGTATCTAGCCCGTAAGTTCGTAGTGGTAACTCTTATTGGTGTAGACCGCAAGGTCCTTACGATTAATACAGACTACCGCTTTGCTACGCGTACTACCATCTCACTGACCAAGGCTTGGGGTCCGGCAGATGGCTACACTACTATCGAGTTACGTCGAGTAACCTCCACGACCGACCGCTTGGTTGACTTTACGGACGGCTCAATCCTGCGTGCGTATGACCTTAACGTCGCTCAGATTCAGACTATGCATGTGGCAGAAGAGGCCCGTGACTTAACTGCTGATACCATTGGTGTCAATAACGATGGTCACTTGGATGCCCGTGGTCGTCGAATCGTGAACCTAGCGAACTCTGTGGATGACCGTGATGCTGTTCCTTTTGGTCAACTTAAGACCATGAACCAGAACTCGTGGCAAGCGCGTAATGAAGCATTACAGTTCCGCAATGAGGCTGAGACTTTCCGTAACCAAGCGGAGGGATTTAAGAACGAGTCTGGTACCAACGCTGCTAATACGAAGCAGTGGCGTGATGAGACTAATGGGTTCCGTGACGAGGCCGAACAGTTCAAGAACACTGCTACACAACAGGCTACCGCTGCTAGTAACTCTGCGTCTGCTGCGCATCAATCGGAGGTAAACTCTGAGAACTCAGCCACAGCCTCAGCTAACTCAGCGCACTTGGCAGAACAACAGGCAGATAGAGCTAAGACCGAAGCGGATAAGTTGGAGAACAATAATGCCTTCGCTGGGACACTAGACTCAATCACACAGCCGACTCCCGGCGCACTTCCGGGTTCCGGTAGGGTTGACTTTAAGGATGGATTCAGCGTTAATGCGCCAGTTCTACGGGCGGACAAGGGTGCGATGTCGTTAGGACGTAAGCGTGTAGCTGGTGATGGTACTACTGACACGTTTATTAACCTGTATAATGGCGACACTTCTCTTGGAGCCATGAAGTTCACTAATGACGGCAACTGGCACTTCACACCTGCTGGGGATGGTGTTGGTAAGACAGTGTATATCGATGCAGACACGTTAGGGGTTCGATCCTTGTACTCTGGAATACACTACTCGTCTCTACCGCAAGGAGGTGTATTACAACTTCTGCGAATGATGAACCCATCTGGTGAAATCAATGCGAGCAACTTAGCGTTCTCGAGGTATTTATTCCAAGGTCGCGGAGGCAATGGCTCTGAGGTTGGGGCATTCTGTGACTCTGGTATCCGCGAGGTAGTGGGCTCCACTTTCGAGTACTTTATCCATTTGGCTGGATTCGGTACTGACTGGTGGTGGGGTTTCCGAAACGATGGGACACTTCGCGTAAATAACACAATATTCAACCATGATGGTAACGTTCATGGTAACGCTTGGGGCGGGTGGCTTAATCAGTGGCTTGGAGCAAATACAGTTAACCACATTGCAATGAGTGGAGTTAACTGGGCACAACTATGGAGGGCTGGAGGTATTGAGGATGGTGGCGGTAGGGTGATAACAGGCATTACAAACCCGAACGGCGATGATCTCATAGACGGGTGTTATTGGAGGGTAATGCAGTACGTCCGCAACGATGGTCAACGCTTTAACATTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ecef6019f8fc4c0cdbcd348298b4f203f4c95b0fcba141a521ea5ada71f977af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and identification of phage PGX1 aganist multidrug-resistant Escherichia coli Hu,D., Li,X. and Qian,P. 2023-09-07 — GenBank