Protein

View in Explore
Genbank accession
XEN16828.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,51
Protein sequence
MALFQFNPSGDWLNDGWKIIGGLTELWRVLSDTGTGNYISAPGSKAGAAVTFPMDTQQVPDGAIITSVTVKMKVGLGGAPALAQLPPGVAPSITVAVAAQDNTSRYMTRTIFPTSTPTEYEIATYQRDALGLAWDVHRLNNLLCRIFSYVGISDIIRVFALWLDIKYRLRPTIAITSPTGTVTTPSPTISWQYSQADGDMQKTVEYKLFTAEQVAKVSFNPETATPVFAQTLQGDLSSVLLPTSINSNSYWVYMRATSSFGARSVWVGRPFTVVGPSPGIPGVDDPNDALGSAVVTVVPDSESGSASLHLRNTSNMLSAQEADAESPFDGHTFSTTNATIVREPVVSFPGGTASWKVTATAAGAAQVVTDYIEIESPLPMTARSQFRAATSGRNCRVVMRFYDDDYAEVGTAMTGSSVADSTGTWTEAEVHGDSPAGAVYTRVTFEILGAAAGEVHNLDHLGVSYGLNTPWSDGSHASRNLLSAYISTAEGTQIGGEFWTPDAASTVVTAAAPATGTGSSGSTCYKMTYNGLNPSIGYRGEGTAWTSPTTGANYTLNKPTAVVTGDLMLAFVTSTESGTITPPAGWSLVNQSRVDDGTTDMALYVLKRTATASEPVSWSDGFLSVQSARRSAVVVAYSGASDILTDTQASTAADTPMYLSTPTLNNTDPNGWRVSAFAVSDNAPTGTAPAALTANRQNPTLLPSISYVGAGTPWGTNGTFNGFTINKPTGVKTGDVIVATVGFIGKNATITPPAGWTLRSQATADNTQAGPYTLAVLYRAAGASEPASWSGTVSGGTLYRTIMVQSTAYRNVDTTAPFLNSGIRTMLNGNTVTTGQAANTNSLGWRIAAFGGLSEAGNSFGTTNEAVERVDSYTSYSVLFGGKAGNTVAMHDSNGPVSTGTYERYAYAANQLYAGVGFLGILKPVGSTASVADEKKRVTATIGASNPYTALSVFDSDGISATGAQSMTGTWTASSGTDKNSMAGWFGILKPAQAQTQGYATAMMNRTVDVSMVNTREIPEADFVTVTAKFTGSSAGTPYLTVAFYRANTLISSQIGEGTPFAAGVYAKSAATFRVPEGTTRMSVGVSVSDREVGDVVYWDRVSLAFGLDDTYRPSTSRAEHPVWSKPQIQYADDDGTGYSDWADLPGLKANPPMFVPRSGSALYTDHTPIPLTNRKYRARTVSLGLSGDIFVSDWGPDSSEFTYEAENYWLKDISNPDNNLRLKVKWDMTQVAKTNSATVFQPLGADLPVVLSEGYKGDTFTLKLTPVNHEERAELRKMLTSGRTLFLQSDIDDAWWVRPIGDLVEDVLPTNNRQSNPLREITCQFVQVEPAE
Physico‐chemical
properties
protein length:1333 AA
molecular weight: 141398,73880 Da
isoelectric point:4,98793
aromaticity:0,09152
hydropathy:-0,15611

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEN16828.1
1 1333
Domain Start End Length (AA) Confidence
N-terminal 1 890 890 0,2721
Central domain 891 1089 200 0,4714
C-terminal 1090 1333 243 0,3838
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-890
Central
891-1089
C-terminal
1090-1333

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage Madraxi
[NCBI] 		3229452 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN16828.1 [NCBI]
Genbank nucleotide accession
PP978820 [NCBI]
CDS location
range 21604 -> 25605
strand +
CDS
ATGGCCCTGTTCCAGTTCAACCCGAGTGGCGACTGGCTGAACGACGGCTGGAAGATCATCGGCGGGCTGACCGAGCTGTGGCGGGTGCTGAGCGACACCGGTACCGGCAACTACATCTCGGCACCGGGCTCGAAGGCGGGCGCGGCTGTCACGTTCCCGATGGACACCCAGCAGGTGCCGGACGGCGCGATCATCACCTCGGTCACCGTCAAGATGAAGGTCGGTCTCGGCGGCGCTCCCGCGCTGGCTCAACTGCCGCCCGGCGTCGCTCCGTCGATCACCGTTGCCGTTGCGGCACAAGACAACACTTCGCGCTACATGACGCGCACCATCTTCCCGACCAGCACTCCTACCGAGTACGAGATCGCGACGTATCAGCGTGACGCGCTCGGCCTCGCGTGGGACGTCCACCGACTCAACAACCTGCTCTGCCGAATCTTCTCGTACGTCGGCATCTCCGACATCATCCGCGTGTTCGCGCTCTGGCTGGACATCAAGTACCGACTCCGGCCGACGATCGCGATCACCAGCCCGACCGGCACCGTCACCACGCCGTCCCCGACGATCTCGTGGCAGTACAGCCAGGCCGACGGCGACATGCAGAAGACGGTCGAGTACAAGCTGTTCACCGCCGAGCAGGTGGCCAAGGTCTCGTTCAACCCCGAGACGGCCACCCCGGTCTTCGCGCAGACGCTGCAGGGCGACCTGTCCTCGGTGCTGCTGCCGACGTCGATCAACTCGAACTCGTACTGGGTCTACATGCGGGCCACGTCGTCCTTCGGCGCGCGCTCGGTGTGGGTCGGCCGCCCGTTCACGGTGGTCGGTCCTTCGCCCGGCATCCCCGGTGTCGACGACCCGAACGATGCGCTCGGCAGCGCGGTGGTCACCGTCGTGCCCGACAGCGAGTCCGGCAGCGCGAGTCTGCACCTGCGGAACACGAGCAACATGCTCTCCGCGCAGGAGGCTGACGCCGAGTCGCCATTCGACGGGCACACGTTCTCGACGACGAACGCAACGATCGTCCGCGAGCCGGTCGTCTCGTTCCCCGGTGGCACGGCCTCGTGGAAGGTCACGGCGACGGCGGCCGGTGCGGCTCAGGTCGTGACCGACTACATCGAGATCGAGTCCCCGCTGCCAATGACGGCCCGCTCGCAGTTCCGCGCCGCGACGTCCGGCCGCAACTGCCGGGTGGTCATGCGGTTCTACGACGACGACTACGCCGAGGTCGGGACCGCGATGACCGGCAGCTCGGTGGCCGACTCGACCGGCACCTGGACCGAGGCTGAGGTTCACGGCGACAGCCCGGCGGGCGCGGTCTACACGCGGGTCACGTTCGAGATCCTCGGCGCGGCGGCCGGTGAGGTCCACAACCTGGATCACCTCGGCGTCAGCTACGGGCTCAACACTCCGTGGTCCGACGGCAGCCACGCGAGCCGGAACCTGCTGAGCGCGTACATCTCCACAGCGGAGGGCACGCAGATCGGCGGCGAGTTCTGGACCCCCGACGCGGCCTCCACGGTCGTCACGGCGGCGGCCCCAGCTACCGGCACCGGCTCGTCCGGCTCGACCTGCTACAAGATGACCTACAACGGCCTGAATCCGTCGATCGGGTACCGGGGTGAGGGCACGGCCTGGACGTCGCCGACGACGGGCGCGAACTACACCCTGAACAAGCCGACGGCGGTGGTGACCGGCGACCTGATGCTGGCGTTCGTCACCTCGACGGAGTCCGGCACGATCACCCCGCCCGCTGGCTGGTCGCTGGTGAACCAGTCGCGCGTGGACGACGGCACGACGGACATGGCGCTGTACGTCCTCAAGCGCACCGCGACGGCATCCGAGCCGGTCTCGTGGTCGGACGGCTTCCTGTCGGTCCAGTCGGCCCGGCGCTCGGCCGTGGTGGTCGCGTACTCGGGTGCGTCCGACATCCTGACCGACACGCAGGCCTCGACGGCGGCCGACACCCCGATGTACCTGTCGACGCCGACGCTGAACAACACCGACCCGAACGGCTGGCGCGTGTCTGCCTTCGCGGTGTCCGACAATGCCCCGACGGGTACCGCTCCGGCGGCCCTGACGGCGAACCGGCAGAACCCCACGCTGCTCCCGTCGATCAGCTACGTCGGCGCGGGCACCCCGTGGGGGACGAACGGCACCTTCAACGGGTTCACGATCAACAAGCCGACCGGCGTGAAGACCGGAGACGTGATCGTCGCGACGGTCGGCTTCATCGGCAAGAACGCCACGATCACCCCGCCCGCTGGCTGGACGCTGCGGAGCCAGGCGACGGCCGACAACACCCAGGCAGGCCCCTACACCCTCGCGGTGCTCTACAGGGCGGCTGGGGCGTCGGAACCGGCCTCCTGGTCCGGCACGGTCTCGGGCGGCACGCTGTACCGGACGATCATGGTGCAGTCGACGGCGTACCGGAACGTGGACACGACCGCGCCGTTCCTCAACTCCGGCATCCGCACGATGCTCAACGGCAACACGGTCACGACCGGCCAGGCGGCGAACACGAACTCGCTCGGCTGGCGCATCGCGGCGTTCGGTGGTCTGTCGGAGGCGGGCAACAGCTTCGGCACGACGAACGAGGCCGTGGAGCGCGTCGACAGCTACACCTCGTACTCGGTGCTGTTCGGCGGCAAGGCGGGCAACACCGTCGCGATGCACGACTCGAACGGCCCGGTGTCGACCGGCACCTACGAGCGGTACGCGTACGCGGCCAACCAGCTCTACGCGGGCGTCGGCTTCCTCGGCATCCTCAAGCCGGTCGGGTCGACGGCATCGGTCGCGGACGAGAAGAAGCGCGTGACGGCAACGATCGGCGCGTCGAACCCGTACACCGCCCTGTCTGTCTTCGACTCGGACGGCATCTCGGCGACCGGCGCGCAGTCGATGACCGGCACCTGGACGGCGTCCTCGGGTACGGACAAGAACTCGATGGCGGGCTGGTTCGGCATCCTGAAGCCTGCCCAGGCGCAGACCCAGGGCTACGCGACGGCGATGATGAACCGCACGGTCGACGTCTCGATGGTCAACACGAGGGAGATCCCCGAGGCCGACTTCGTCACTGTGACAGCGAAGTTCACCGGTTCGAGCGCAGGCACGCCGTACCTCACGGTCGCCTTCTACCGGGCCAACACGCTGATCAGTTCGCAGATCGGTGAGGGCACCCCGTTCGCGGCGGGCGTCTACGCGAAGTCGGCGGCGACGTTCCGGGTGCCCGAAGGTACGACGCGCATGTCGGTCGGCGTTTCGGTCTCGGACCGCGAGGTCGGCGATGTCGTGTACTGGGACCGCGTCTCGCTGGCGTTCGGGCTCGACGACACGTACCGGCCGAGCACCTCGCGCGCGGAGCACCCGGTGTGGAGCAAGCCGCAGATCCAGTACGCGGATGACGACGGCACCGGCTACTCGGACTGGGCGGACCTGCCCGGCCTGAAGGCGAACCCGCCGATGTTCGTCCCGCGCTCCGGCTCGGCGCTGTACACCGACCACACGCCGATCCCGCTGACGAACCGGAAGTACCGCGCTCGCACGGTGTCCCTCGGCCTGTCCGGCGACATCTTCGTCTCCGACTGGGGACCGGACAGCAGCGAGTTCACGTACGAAGCGGAGAACTACTGGCTCAAGGACATCTCGAACCCGGACAACAACCTCCGGCTCAAGGTGAAGTGGGACATGACGCAGGTCGCGAAGACCAACAGCGCCACGGTGTTCCAGCCGCTCGGTGCGGACCTGCCAGTGGTGCTCAGCGAGGGCTACAAGGGCGACACGTTCACCCTCAAGCTCACGCCGGTCAACCACGAGGAGCGCGCCGAGCTGCGCAAGATGCTGACGTCCGGCCGGACCCTGTTCCTGCAGTCGGACATCGACGACGCCTGGTGGGTGCGCCCGATCGGCGACCTGGTCGAGGACGTGCTCCCGACGAACAACCGGCAGTCCAACCCGCTGCGCGAGATCACCTGCCAGTTCGTGCAGGTCGAGCCCGCAGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0c7e17bf041ab0fbfd4a0454665c6e47c809b02d45c530cafd5097d46b35fe8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8210
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50