Protein

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UniProt accession
A0A8S5PQZ2 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAKFLDLNGLTHVIDKIKEWTNGSFRKKTEKVVSTDVTYNGKTLDEAIKTGEFKGEKGDAGAAGPQGPVGPAGPAGAKGEQGAQGPQGPAGEAFKIAKTFTSIAEMNKGFATDGVKTGQFVVIDTGNVQDEDNAKLYMKGAESYTYITDLSGATGLTGPQGPQGLQGAAGPAGPAGAKGEQGLQGPAGAKGERGETGPQGPQGLKGERGETGPMGPQGPAGSDANVEQITNEEIDSLFQA
Physico‐chemical
properties
protein length:240 AA
molecular weight: 24278,50710 Da
isoelectric point:4,91404
aromaticity:0,05417
hydropathy:-0,62417

Domains

Domains [InterPro]
DC_2166
ATT
6–93
DC_2166 IPR008160
IPR050149
Unmapped
53–222
IPR050149
IPR008160
STR
55–92
IPR008160 DC_0620
G3DSA:1.20.5.320
STR
194–239
G3DSA:1.20.5.320
A0A8S5PQZ2
1 240
Architecture
ATT
STR
ATT 6-93 | STR 94-239 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctkJH11
[NCBI] 		2825641 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE09192.1 [NCBI]
Genbank nucleotide accession
BK015484 [NCBI]
CDS location
range 33771 -> 34493
strand +
CDS
ATGGCAAAATTCTTAGACTTAAATGGATTGACACACGTTATTGATAAGATTAAGGAATGGACAAACGGATCTTTCCGGAAAAAAACAGAAAAAGTAGTTTCGACAGATGTAACTTATAATGGCAAAACACTTGACGAAGCAATTAAAACAGGAGAATTTAAAGGGGAAAAAGGGGATGCTGGAGCAGCAGGACCACAAGGACCAGTAGGACCAGCGGGACCGGCTGGAGCTAAAGGAGAGCAGGGTGCACAAGGACCGCAAGGACCGGCAGGCGAAGCATTTAAAATCGCCAAAACATTTACATCTATAGCAGAAATGAATAAAGGGTTTGCGACAGACGGAGTAAAAACGGGACAATTTGTTGTGATCGACACCGGAAACGTACAAGATGAAGACAATGCAAAATTGTATATGAAAGGGGCAGAGTCCTATACATATATCACAGACCTCTCCGGAGCCACTGGATTAACAGGGCCGCAAGGACCGCAGGGATTGCAGGGAGCTGCTGGACCGGCAGGGCCGGCTGGAGCCAAAGGAGAACAGGGCTTACAAGGACCAGCAGGAGCTAAAGGCGAAAGAGGAGAAACAGGACCGCAGGGCCCACAAGGATTAAAAGGGGAAAGAGGAGAAACGGGACCAATGGGACCACAGGGACCTGCTGGATCAGATGCGAATGTAGAACAGATCACCAACGAAGAGATTGATTCGTTATTCCAAGCATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
9ad4dad8fa9c8f94518399505366a452b2dcd898458ddf0970b3953a47dd2b3a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50