Protein

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Genbank accession
QIQ67878.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDLNAANATNGNMIFNRIAGTGSGIASSGRVGAISLQNGATAGAAAAVTFERGGGFFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGLGGVGSYGVFAVLDNAAPTATVQPGVVVDGSILIYSSCSANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:176 AA
molecular weight: 17829,60860 Da
isoelectric point:6,51889
aromaticity:0,08523
hydropathy:0,13466

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIQ67878.1
1 176
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0043
Central domain 11 165 156 0,0573
C-terminal 166 176 10 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-165
C-terminal
166-176

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage datas
[NCBI] 		2719601 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus datas >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIQ67878.1 [NCBI]
Genbank nucleotide accession
MT119378 [NCBI]
CDS location
range 27907 -> 28437
strand +
CDS
GTGGATTTGAACGCCGCGAACGCCACCAACGGAAACATGATCTTCAACCGCATCGCCGGAACTGGTAGCGGGATCGCCTCTTCCGGCCGCGTCGGCGCAATCAGTCTCCAGAACGGCGCAACGGCAGGCGCCGCCGCAGCCGTAACATTCGAGCGCGGTGGCGGTTTCTTCGTCAACTTCGGTTTGGACACAGACAACGTTCTCAAAGTGGGCGGCGGAAACCTGGGGGCGAACGCCTATCCAGTCATCCACGCCGGGAACTACAATAACTACATTAACCAGGCGCTGGTTCAGGTCGGTCTGGGCGGAGTCGGTTCCTATGGCGTTTTCGCGGTTTTGGATAATGCCGCTCCAACCGCAACCGTTCAACCCGGAGTTGTCGTGGACGGTTCCATTCTCATCTACTCATCTTGCTCCGCAAACTACAATAGCGGTCAAAGACCTGCCGGAACTTGGCGCTGCATGGGCTATGTAGTAAACCGGGACGCCAACACCCCTGACTCAGCGACCCTTTTCCAGCGAGTGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f4074f08044acaa8d212fd157d599e286907bcede520ec06d00c78db3f18fa1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6881
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank