Protein

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Genbank accession
UYE97266.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MANVFGNNNSRNCSPGGGIISSPKPSVVPARSVSSNPNVFKGEATTSEKLNPRDFYTRREIDRYLNDKADLSSVYEKEDSYSSAQIDALFSGLNLSTYATLSYTTNLVNTTASTINADLNSNYYERSLLYTRSEVDAAISSADIGNSYVSKAPDSLDDITIDPSVSNLSVSLIVKSSNNTETTQVQRWENSSTDLLAAIYADGKATFTGKTTIGENVSTGEVALDTSERRIAGVANPVDNLDAVNKVYMETFITTTIDDVLTDTDENYIVDALQY
Physico‐chemical
properties
protein length:275 AA
molecular weight: 29800,16420 Da
isoelectric point:4,33087
aromaticity:0,07636
hydropathy:-0,39018

Domains

Domains [InterPro]
DC_1919
ATT
2–272
DC_1919
UYE97266.1
1 275
Architecture
ATT
ATT 2-272 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM54
[NCBI] 		1137744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE97266.1 [NCBI]
Genbank nucleotide accession
OP053362 [NCBI]
CDS location
range 68154 -> 68981
strand +
CDS
ATGGCAAATGTATTCGGTAATAATAACTCAAGAAATTGCTCTCCTGGAGGGGGAATAATATCGTCTCCTAAACCTTCTGTCGTACCAGCTAGATCGGTATCTTCTAACCCAAATGTTTTCAAAGGAGAGGCCACTACATCAGAAAAATTAAATCCAAGAGATTTCTATACAAGAAGAGAAATAGATCGATATCTGAATGATAAAGCCGATCTCTCTTCTGTATATGAAAAGGAGGATTCTTATTCTTCGGCTCAAATTGATGCGTTATTTTCAGGGTTAAATTTAAGTACGTACGCAACATTATCTTATACAACAAATCTTGTAAACACAACTGCTTCTACAATAAACGCAGATTTAAATAGTAATTACTATGAAAGGTCTTTACTCTATACAAGAAGCGAAGTAGATGCGGCAATCTCATCGGCTGATATCGGAAATAGCTATGTATCTAAAGCTCCAGATTCTTTAGATGATATCACAATTGATCCATCTGTAAGTAATCTATCTGTTAGCCTTATTGTAAAATCTTCTAATAACACAGAAACTACACAAGTACAAAGATGGGAGAATTCTTCTACAGATTTGCTTGCGGCTATATACGCTGACGGAAAAGCAACATTTACAGGAAAAACAACCATAGGCGAGAATGTTAGCACTGGTGAGGTTGCACTTGATACAAGTGAAAGGAGAATTGCAGGCGTAGCAAACCCGGTGGATAATCTTGATGCGGTTAATAAAGTCTACATGGAAACGTTTATTACCACAACAATCGATGATGTTTTAACAGACACCGATGAAAATTATATAGTAGACGCACTACAATACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ebd2389789177bd7bdd2268ee69131d1bbafc33b57be4bea51fec4171362ec1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7507
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank