Protein

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Genbank accession

AGK86857.1 [GenBank]

Protein name

tail spike protein

RBP type

Evidence GenBank

Probability 1,00

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,95

Protein sequence

MTNGWMYFIDFDQFGIKDDGTDATSTTSGFVAAFKRAVELGHSAVYVPEGTYLIDAVGVGDYLPEYGGGLQFPSNIEVILHEKALFKVQPNDSTGYACFNLEGVENVTIRGGHIVGDRHEHNYRQDVNENRRTHEWGFGIQVRGSKNVTIENVTIEDCTGDNIWVTSKGMMNWPGVYIPSESVTIRKCRTLRGRRNNIAAGASVGLLIDDCDIIEAGGDEIGPQLGIDLEGYADNSIKYQHPYEINVINCRFKDNGRGSMNINVSGKVNAIGNFCDDYIGYGFSTDVTISNNVITNETGVHKKFGIDSIRKSTSETANRAVVTGNVIRGFQTGIAARGKTVTVSNNILEDISSIGIYPYLCDQAVVSSNIIDSDCLHIWVRESKDIKVSDNKGTGAANNVSIKVDASKDVLLSDNEVSGKGGVRVSRSTNVRIVDNDIDMIGPDYGIYFDKQSEVHLRDNLVKNAAFTAIRGYADQYSSYIKGNIIQDCKYMIAIHIDGGSKHMIKDNDITFRRGSNAGYGVYLIGANDSRLHNNDIRVMDGFGLINSFYTIQSTNTKLIGNTYDTGEMKTNDTDFLRYNEKLPK

Physico‐chemical properties

protein length:	585 AA
molecular weight:	64398,14100 Da
isoelectric point:	5,39302
aromaticity:	0,08718
hydropathy:	-0,34889

Domains

Domains [InterPro]

IPR012334
STR
12–374

IPR012334 IPR011050

IPR011050
STR
29–418

IPR011050 IPR006626 IPR006626 IPR006626

IPR051550
Unmapped
86–539

IPR051550

IPR006626
Unmapped
104–144

IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626

IPR039448
ENZ
136–272

IPR039448 IPR007742

DC_0453
RBD
359–580

DC_0453

IPR012334
STR
392–581

IPR012334

AGK86857.1

1 585

Architecture

STR

STR 12-581 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	12	374	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	29	418	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR051550	Unmapped	-	86	539	InterPro	SCF Complex Subunits and Alginate Epimerases	-	-	-	-
IPR006626	Unmapped	-	104	144	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	136	272	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	145	167	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	180	202	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	203	231	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	242	264	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	284	310	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	317	337	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR007742	CBM	DC_0096	336	510	InterPro cluster	Periplasmic copper-binding protein NosD-like, beta helix domain	C-terminal	High	Text match	28 proteins / 31 hits
IPR006626	Unmapped	-	338	360	InterPro	Parallel beta-helix repeat	-	-	-	-
DC_0453	RBD	DC_0453	359	580	Novel HMM	DC_0453	C-terminal	Low	Positional only	102 proteins / 102 hits
IPR011050	STR	IPR011050	376	561	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	383	404	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR012334	STR	IPR012334	392	581	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	407	427	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	428	451	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	476	499	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	500	526	InterPro	Parallel beta-helix repeat	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

AGK86857.1

1 585

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	23	23	0,9394
Central domain	24	574	552	0,9957
C-terminal	575	585	10	0,4471

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-23

Central
24-574

C-terminal
575-585

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Bacillus phage SIOphi [NCBI]	1285382	Uroviricota > Caudoviricetes > Herelleviridae > Siophivirus > Siophivirus SIOphi
Host	Bacillus subtilis [NCBI]	1423	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Genbank protein accession

AGK86857.1 [NCBI]

Genbank nucleotide accession

KC699836.1 [NCBI]

CDS location

range 34503 -> 36260
strand +

CDS

TTGACTAATGGGTGGATGTACTTCATTGATTTTGATCAGTTCGGTATCAAGGATGACGGGACAGATGCTACATCAACAACTAGTGGGTTCGTAGCAGCGTTTAAAAGGGCCGTAGAACTTGGTCACTCTGCTGTATATGTACCAGAAGGTACTTACTTAATTGACGCTGTAGGCGTTGGTGACTACCTCCCTGAGTACGGAGGAGGTCTTCAGTTCCCGTCCAACATTGAAGTTATCCTACATGAGAAAGCCCTTTTTAAAGTCCAACCGAATGACTCTACCGGGTACGCTTGTTTTAACTTAGAAGGCGTAGAAAATGTAACAATCCGAGGCGGACATATTGTAGGTGATCGTCATGAACACAACTACAGACAAGACGTTAACGAGAACAGACGTACTCACGAATGGGGATTCGGTATCCAAGTTCGTGGAAGTAAAAATGTTACAATCGAAAATGTAACAATTGAAGACTGCACCGGAGATAACATCTGGGTAACATCTAAAGGTATGATGAACTGGCCGGGAGTGTACATTCCATCTGAAAGCGTAACAATCAGGAAATGTAGAACACTTAGAGGAAGACGAAATAACATTGCTGCCGGAGCAAGCGTAGGTCTACTTATCGATGACTGCGATATTATTGAAGCAGGCGGGGACGAAATTGGACCGCAGCTAGGTATTGACCTTGAAGGATACGCAGACAATAGCATCAAGTACCAGCATCCTTACGAGATAAATGTGATTAACTGCCGATTTAAAGACAATGGAAGAGGTTCTATGAACATCAACGTGTCTGGTAAAGTTAATGCTATCGGTAACTTCTGCGATGATTACATCGGTTACGGGTTTTCAACTGATGTAACTATTAGTAACAATGTTATCACAAACGAAACAGGGGTTCACAAAAAGTTCGGGATAGACTCTATTCGTAAGTCTACTTCGGAAACAGCTAACAGAGCAGTTGTTACTGGCAATGTAATTCGTGGATTTCAAACGGGTATCGCTGCTAGAGGTAAAACGGTTACTGTAAGCAACAACATCCTAGAAGATATTAGTTCTATTGGAATCTACCCTTATCTATGCGATCAAGCAGTAGTATCGAGTAATATCATAGACAGCGACTGTCTACACATTTGGGTTAGAGAATCGAAGGATATAAAAGTTAGTGACAATAAAGGTACTGGCGCAGCTAACAATGTATCTATAAAAGTAGACGCCTCTAAAGACGTATTACTAAGCGATAATGAAGTTTCTGGAAAAGGTGGAGTTCGAGTAAGTCGCTCAACAAATGTGAGAATTGTGGATAATGACATTGATATGATCGGCCCAGACTACGGCATCTACTTTGATAAACAGTCTGAAGTACATCTTAGAGATAACCTTGTTAAAAACGCCGCTTTCACCGCAATCAGGGGTTATGCAGATCAGTACAGCAGCTACATAAAAGGAAACATCATTCAAGATTGTAAGTACATGATCGCTATTCATATTGACGGTGGGTCAAAACATATGATTAAAGACAATGATATTACATTCCGCAGAGGGTCTAATGCAGGCTACGGTGTCTATTTAATCGGAGCAAATGACTCTCGTTTACATAATAATGACATTAGAGTAATGGATGGGTTTGGCCTTATCAACTCTTTCTACACGATCCAGTCTACGAACACTAAGTTGATAGGGAATACATATGATACAGGTGAAATGAAAACAAACGATACTGACTTCTTACGATACAACGAGAAGCTACCTAAGTAA

Genome Context

Tertiary structure

PDB ID

191e6ba4fac17a0d1f37e83350f2153bf111f300fad8da5638cc01cc29d76946

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8940

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence