Protein

View in Explore
Genbank accession
AAR97632.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADFSQTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDGEVRLFRLPAVDAPSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQFVNMHTGAVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVGIMEGTPCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQGTAAVQGIPAEEQVIFCSRNKSKVYAMNYVREQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDIMDARLLDFSSNSGSSNGTRLVDYNPLGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV
Physico‐chemical
properties
protein length:594 AA
molecular weight: 65533,64300 Da
isoelectric point:5,11872
aromaticity:0,09428
hydropathy:-0,24377

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAR97632.1
1 594
Domain Start End Length (AA) Confidence
N-terminal 1 584 584 0,8858
Central domain 585 584 1 0,0021
C-terminal 585 594 9 0,8220
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-584
Central
585-584
C-terminal
585-594

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP2
[NCBI] 		260372 Uroviricota > Caudoviricetes > Enhodamvirus >
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAR97632.1 [NCBI]
Genbank nucleotide accession
AY505112 [NCBI]
CDS location
range 11563 -> 13347
strand +
CDS
ATGGCAGACTTCAGTCAGACCAGCTTCAAGGGGGGCGTAATTGCTCCCCGACTTCAATTCAACGAATATGAGTCGGCGTACCATCACTCTATTGAGGATGCTGTCAACTTTGTCGTTACTGAACAAGGAAGCTTAATAACACGATGCGGCTCGGAGGAAGTTGGATTGTGCCAAGATGGCGAAGTCCGCCTTTTCCGATTACCAGCTGTTGACGCACCCTCTAATGACGTTATCGTAGAGGTGGGTAATACTAACATAGCTGTTTGGGTTAATGACGTACGTCAGGTGGTGGCCAATACTCCCAGCGAATGGCGCAACACGATTGACCGAATCCAAACAGCATACGACACCATAGGGGACGATGCAGGTGCAGCCAACACAGGACGCCTGATTATGGTTCATCCTGCATTGCAGCCCAAACGACTGTACCGCGACAACAATAATGCATGGCAATTCGTGAACATGCACACAGGCGCGGTTCCTGCTGAGTGGTCTCCTAGTAATTATCCTCAGACAGTGGGCATTTTCCAAAACAGAGTTTGGTATGTGGGTTCTCCCGTTCACCGGACTTATTTTTGGGCTACGCGAGCAGGTAAGTTGGAAGATATCGCGCCTAGCACGGCCAACAATCCTAATGACCCTATTAGTTTCGTGGGTATTATGGAGGGGACGCCTTGCTGGATTATCGCATCTTCTGACGTGTTGACCATCGGAACAACAATAAACGACTACCAGTTAGCTGCCTCTACTGGTGTGTCGGTCACAGCGGCGACGGCCATATTGCGTCGTTCGTCTGTTCAGGGGACGGCGGCAGTCCAAGGGATTCCTGCGGAGGAGCAAGTTATTTTCTGCTCCCGCAACAAGTCCAAAGTATATGCCATGAACTATGTCAGGGAGCAGGATAACTGGATTCCTGACGAAATGTCGAGCCAAGCACAGCACTTATTTACGCCGATTTCGTCTGCGAAGGGTGCTAGCGTCCGTAGGGTCGCCTATATCTCAGATGCGGCGAAGTCTCTTTGGGTTGTGTTAGAGAATGGTCAAATCAATTATTGTTGTTTTGACCGCACGACGGACACCAAAGCATGGACTCAATTGGAGCTTTCAGGCGGAAAGGTGATTGACATCGCCGCCGCATTCAACCCAGACTCCGATTACGCTTACGTTGCCGTGGTCAGAAGCAAGGCGATAAACGGAGTTCAAAAGAACTACACCGTGTTGGAGAAAATCTCGTCGCCTCGCACTGATTGGAAGAGAGCAGATGGATGGGTAGTGGCACAAGTCAACCAAAACGGCGACGTGCTGAACTTAGACAGATACATCGGCAGAACGGCAGTAATCTTCAGCAAATACGGGCTAGAAGCCGAGGTTGAAGTAAACAATATCGGTTTGACGCACAGAATCAACGGCTATGACCCGAACACCGTGTACTATGTAGGGTACAAGATGGATAGCTACTTCCGCACATTAACCCCATCAAATGGAGACATGAAAAAGTCGATGTTTGGGAGCAAAATACGGATTAGCAAGGTGCAGTTAGCCCTTTTTGATAGCATAGAGCCAACTGTAAATGGCGAACCTGCCGACGACCGCAGCACGGACGACATTATGGATGCGAGATTATTAGACTTTTCTTCTAATTCAGGCAGTAGCAACGGCACAAGACTAGTCGACTACAATCCTTTGGGTTGGGAAAATGACGGCAAAATGGTGATAGCCGTTGAGCAACCTTTCTTATGCGAGGTGGTCGGTGTCTTCTCAGTAGTTCAATCCAACAAGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5864a48c987a7be03523e6508375965bcba6cfaf0d0eb12e2ae313427699c19b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8700
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Vibrio cholerae phage VP2 complete genome Wang,D., Kan,B., Li,Y., Liu,Z., Gao,S., Liu,Y., Liang,W., Zhang,L., Yan,M., Li,W., Liu,G., Liu,Y., Li,J., Diao,B., Zhu,Z. and Qiu,H. — — GenBank