Protein

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Genbank accession
AXH70891.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTLATTVAGIRSDLGELTHNGPIGNLPNSTTGQLWFSDKHLEPGLVLNNKFYWLFDCDFTIEMLFGTTEDDDSLQITITSPVSATQVVKKADLVSYWPDFATYVNGDNIRASDQDGVYSPGEDGVVQRDIWGPLEGYAYMVTKGEFKGLIKRRSQDSFFGYASSLGGEADYVMWLLLPGVSDTTGHQEWMDSHPSCPYIRPGAAVGLSENEVNQLIDNKELLAVANSLVKQGRLSWDSQNGLVKYSTEPSDANQAKSDLTIPSLGYVKSLIGAVTSGEFIVNKEIQNVDLNTLKSPGQYAVSQSVANSPTVSNDRHFNIVLVFGYGGSNGTQFFIDADFDSASDAPHVFVRAWENNNWTPWADMSPTANKIKHHQLRIPCNTTYWTGSFTTTNDHRLEKLKQLPSNMTLLTAYDEPFLKPLSQGAFEFKAGHLVTVTFHVDDVDFDDANVSTYYGVEINNGGIWERDTIRHHPQLDGHMRRQLTFVTNGGTTEFYIKGEWYNLTNNFVIMTVTDHGIVDRDVHSG
Physico‐chemical
properties
protein length:525 AA
molecular weight: 58335,11550 Da
isoelectric point:4,85385
aromaticity:0,10857
hydropathy:-0,35543

Domains

Domains [InterPro]
DC_1290
STR
224–524
DC_1290
cd19958
STR
287–361
cd19958
AXH70891.1
1 525
Architecture
STR
STR 224-524 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH70891.1
1 525
Domain Start End Length (AA) Confidence
N-terminal 1 363 363 0,8721
Central domain 364 514 152 0,0050
C-terminal 515 525 10 0,9939
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-363
Central
364-514
C-terminal
515-525

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70891.1 [NCBI]
Genbank nucleotide accession
MH595538.1 [NCBI]
CDS location
range 158533 -> 160110
strand +
CDS
ATGACATTAGCAACTACAGTTGCCGGGATCAGATCAGATCTCGGCGAACTAACACATAATGGACCTATCGGTAATCTGCCCAATAGCACCACAGGCCAGTTATGGTTTTCGGATAAGCATCTAGAGCCAGGACTAGTTTTAAACAACAAGTTCTATTGGCTGTTTGATTGTGATTTCACAATAGAAATGTTATTTGGCACTACGGAAGATGATGATTCATTGCAGATAACCATTACTTCCCCTGTATCAGCAACACAAGTGGTCAAGAAGGCAGACTTGGTTTCTTATTGGCCTGATTTTGCGACATATGTCAATGGCGACAATATACGTGCATCTGACCAGGACGGCGTCTATAGTCCAGGCGAAGATGGCGTCGTTCAGCGTGACATATGGGGTCCTCTTGAGGGTTATGCATATATGGTCACTAAAGGCGAATTTAAAGGCCTTATTAAAAGAAGATCTCAGGATTCTTTCTTTGGCTATGCTAGCAGTCTCGGAGGCGAAGCCGATTATGTTATGTGGCTTCTTCTTCCTGGTGTTTCCGATACAACCGGCCATCAAGAGTGGATGGATTCGCATCCTTCTTGCCCTTATATCAGGCCAGGAGCAGCGGTTGGTCTTTCGGAGAATGAGGTGAATCAACTTATTGACAATAAGGAATTGCTTGCCGTTGCAAATTCTCTTGTTAAGCAAGGTCGATTATCTTGGGATTCTCAGAATGGTTTGGTTAAATATTCAACCGAGCCTTCTGATGCTAATCAGGCAAAATCCGATCTGACAATTCCTTCGTTAGGATATGTCAAAAGCCTGATAGGTGCCGTTACGTCCGGGGAATTTATTGTAAATAAGGAAATACAGAATGTAGATCTCAATACCTTAAAATCCCCAGGTCAATATGCCGTCAGCCAGTCAGTGGCTAACTCGCCTACAGTCAGCAATGATAGGCATTTTAATATAGTTTTAGTTTTTGGCTATGGCGGTAGTAACGGCACACAGTTCTTTATCGATGCCGATTTTGATAGCGCCAGTGATGCCCCTCATGTTTTTGTTCGCGCATGGGAAAATAATAACTGGACTCCGTGGGCCGATATGTCTCCAACGGCCAATAAAATTAAACACCATCAACTGAGGATCCCTTGTAATACTACTTATTGGACGGGCTCCTTCACTACCACCAATGATCATCGTCTAGAGAAACTGAAGCAACTCCCTAGTAATATGACATTACTCACAGCCTATGATGAGCCTTTCTTAAAGCCTCTTTCACAGGGCGCATTTGAATTTAAAGCAGGTCATTTAGTAACAGTGACCTTTCATGTTGACGATGTCGATTTTGATGATGCTAACGTCAGTACTTATTACGGAGTTGAAATCAATAATGGCGGAATATGGGAAAGAGATACGATCAGGCATCACCCGCAGCTGGATGGACACATGCGCCGCCAACTTACATTTGTTACTAATGGCGGGACTACTGAATTCTACATAAAAGGAGAATGGTACAACCTGACTAATAACTTCGTTATTATGACGGTAACTGATCATGGCATTGTTGACCGAGACGTCCATTCTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a66988ce845f52c2bdb4da6317f7a96452618f2a717153d5bcfa6eb311f67275
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5132
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank