Protein

View in Explore
Genbank accession
XCO39011.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,52
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTVVNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMSPVTAVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGMDYSGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAEADGAMCRVGTASSETAWYQFDYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNGSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQGGVFTVPAVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITVPCRTNADTTEVSLFTDGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85898,24630 Da
isoelectric point:5,05960
aromaticity:0,08651
hydropathy:-0,24008

Domains

Domains [InterPro]
IPR058003
TTP
4–786
IPR058003
XCO39011.1
1 786
Architecture
TTP
TTP 4-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39011.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9916
Central domain 147 345 200 0,1371
C-terminal 346 786 440 0,1026
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146024
[NCBI] 		3232204 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39011.1 [NCBI]
Genbank nucleotide accession
PP889474 [NCBI]
CDS location
range 32257 -> 34617
strand +
CDS
ATGGCGCAATCATTAGAAGGTACTATTCAGAGCTTGCTGCAGGGCGTTTCACAGCAGGTTCCGAGAGAGCGCCAACCAGGACAACTGGGGGCGCAGCTGAATATGCTCAGCGACCCGGTTTCCGGTATCCGCCGTAGACCGCCGGGTGAGATTGTATGGGAAAGCACAATCGATAACCCTGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGACGGTAGGCACCTGCTGATTAACACTAGCAACGGTAACTGGTGGCTGTTGGCTAAGAATGGAAAGACTGTCGTTAACTCTGGCAACGACCCGTACTTTGTCACCACTGTAGGTCAGACCTCTTTGCAGACCGCAAGTATTGCAGGGCTGACGTATATCCTGAATACGGAGATGTCTCCGGTCACTGCCGTGGACAACACCGGGCGTATCGACCCCAGCACCACTGGGTTCTTCTACGTTAAATCTGCAGCATTCCAGAAACGCTGGAACGTCACCGTCACCTCTGCTGGGATGGATTACTCCGGGGACTACACTGCACCGGCTGCCGGTAGCACCAGTGGCAACGCTGAGGAGGTATCAGGTGCCTACGTTGCTCAGCAGCTGCGGGACTCTCTTGTAGCGAATGGGTTGCCAGCTGGGAACGTGAGCGTACGTGGCGCGTACCTGTTCTTCTATGGGTTAAGCAACTGCGTGGTATCCTCTGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCCGCAGAAGCCGATGGGGCAATGTGCCGAGTAGGTACGGCCTCGTCTGAGACGGCGTGGTACCAATTCGATTACAGTACCCGCACCTGGTCTGAGGTGGGGGCTTACGGCAGCATCACCAAGATTACGAACATGCCCAGAGAGCTTGCCGCGGATGACAACATTATTGCGCGGGATTGGGAGGGGCGCTTAGCGGGCAACGACGATAATAACAGTAATCCTGGTTTCGTCGAGAATGGTTATATCACAGGCATCGCAGCTTTCCAGGGCCGCCTGGTTCTGCTTAGTGGCAGCTCCGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCTACTGTGACGTCACTGCTAGATACTGACCGTATCAGCATTAGCTCTGCGTCTGCCCAGGATTCTGTGTACCGCACCGCTGTGCAGTTCAACCGGGACTTGGTTCTGTTTGCTAATAGCATGCAGGCGGTTGTGCCGGGCTCTGCAGTGCTTACGCCTACCAACGCAAGCATCAGCATCACCAGCACCTATGATTGTGACAGCCGTGTGACTCCGGTGATGGCGGGGCAGACAGTAATCTACCCGAACAAGCGCAACGGCAGTTACGCCGGTATTCTGGAGTTAATCCCGTCGCCGTACACCGCTGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAATAGCCTGCTGGTATACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAATGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTGGAGGACGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCCAGCAACAAGCTCCTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGCTCAGAATACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTACAGGGAGGGGTGTTCACTGTTCCGGCGGTATTGCGCCCGGTTGGGTGGGCGGACAACTACAAGGAAGAGCTTATCCTAACGTACTTACCCAGCAACCCTATGGGGCCTACTGAGGTTGGCATCAAGGAAATTGCCGGTGAGAACACCCTACGGGTTGTGCGCGGCGTACCTGATGGTACTTATGTAATCGGGAGACGTTACCGTAGTACGTTCACGCTAACTACGCCTATTCTACGGGACCAGAATGACAAGCTCGTGGGGAGTGGGCATGTGCGCCTGCTGCGTCTGGACGTGGCGGTACGTAACTCTGGGCACTTCGATGTACAGGTACTAGACACCCCTCGGGACGTCAATTGGGGTGGGGAGCTAACTGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGCAGGCCCTGCGTATGGACCTGGCTACGATTACCGTGCCATGTCGTACCAACGCAGACACAACCGAGGTGTCACTATTTACTGACGGTTCTATGGAACTGAACGTGTTGGATATATCGTACATCCTGCGCTACAACCAACGCAGACGGAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59010246821828796cb8be6f1fe238ebe6a78e67a856254a4673871789dede7d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3144
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank