Protein

View in Explore
Genbank accession
XRX02941.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTLIRGSKGGGGGSASTEAVDTLSSTAYAQILDLISEGPIFGFPEGKSAGQCIFFDGTPLQNDDGSYNFKLKQFDYRLGYVDQDYIPGFESSSSEKQVGVSLTASSPWSQTITNIDINAVRVTLGVNALSKTDTSTGNVTGYRVAYQIQLSKDGGSFTTVLDTAFDGKASSTYTRSHRIELSGAKSQYTVRVVRLTPDATTQYVQDKTNIVSYAELIDAKLRYPFSALVALMLDAEQFSSMPVRSYDVKGLLVKYPSNYNPQTRQYVGVWDGTFVSGWTDNPAWIFYDLVLNKRYGLGKYVDATMIDRYALYQIAQYCDVLVSDGKGGKEPRFTCNCAITSRADAIKVLQDLASVFRGIAYWSAGTVVASSDMPSDPVYVYTAANVVNGQFKYVGSSLKSRYTSALVTFNDPDNGYKQTVEYVEDAEGIRRYGLNKAEVTAFGCTSRSQAQRVGHWLLLTSRYETNAVTFSVGMYGTLAQPGQVIAIADPSRSGKRIGGRIKQAASKGTVTLDQAPEGAARGDRLTVVMPNGMAQSRAVQSVSDSIVSVQPEFDVQPAPGAVWMLETATLKSQLFRVTSVSEREGITFEISATQHEPGKYDAVDNGAAIEYRPITGETFKAQRPPANVRLSQFVVIDQGIARTNMTVAWDAAPNATAYVVEFRRDNGDWISAGRTGGLSLDVGNIYSGRYVARVRAVNALDISSPFAYSPETRLNGKTGSPPRPATLVATTDQVLSIGLNWSFPPNSGDTSYTEVWYSTTPRFANATPLSRYGFPTNSASLLNLAAGASLYFWARLVDTSGNIGPWYPAESEPGVYGAATSNATAILAYLVGKITDTELSQELLGPIKEIPDIQQKVTENAAAISSERQARIDENAALAGKIDKVSAQIVVPDMAGSSGDLAGSTTVYAGVWSEQSARVEADLALSRRIDTTTAQLSNTQHSILSAVQTETRARVDADSAQAELITKVQAKADANAANVETVAKSYADLNGRVSASYNIKTQVTVDGRLYVAGIGVGIDNNNGQIESQVLVAAQRFAVVDPNGHTVTSPFVIQGGQVFINQAFIGAGWIQNAMIGDYIQSNNYVAGRSGWRLDKSGWFEINNTDGQGNRLNIDSNGLRGFDANGTLRYRLGFY
Physico‐chemical
properties
protein length:1133 AA
molecular weight: 122168,83120 Da
isoelectric point:5,52938
aromaticity:0,09444
hydropathy:-0,21827

Domains

Domains [InterPro]
DC_0014
STR
1–1133
DC_0014
IPR053171
Unmapped
6–847
IPR053171 IPR015406
IPR055385
ATT
93–219
IPR055385 IPR032876 IPR013783
IPR003961
STR
624–705
IPR003961
IPR036116
STR
639–722
IPR036116
XRX02941.1
1 1133
Architecture
STR
ATT
STR
ATT
STR
STR 1-92 | ATT 93-219 | STR 220-340 | ATT 341-501 | STR 502-1133
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX02941.1
1 1133
Domain Start End Length (AA) Confidence
N-terminal 1 497 497 0,8257
Central domain 498 1076 580 0,0599
C-terminal 1077 1133 56 0,7874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-497
Central
498-1076
C-terminal
1077-1133

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_SBP9
[NCBI] 		3416991 Viruses >
Host Burkholderia sp.
[NCBI] 		36773 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX02941.1 [NCBI]
Genbank nucleotide accession
PQ789808.1 [NCBI]
CDS location
range 14885 -> 18286
strand +
CDS
ATGACATTGATTCGAGGAAGCAAGGGGGGCGGAGGCGGCAGCGCCTCCACTGAGGCAGTCGACACACTCAGCAGCACTGCATACGCGCAGATTCTCGACCTCATTTCGGAGGGGCCGATTTTTGGCTTTCCGGAGGGTAAGAGCGCGGGTCAATGTATCTTCTTCGACGGGACACCGCTCCAGAACGACGACGGTTCGTATAACTTCAAGCTCAAGCAATTCGATTACCGTCTCGGGTACGTAGACCAAGATTACATACCCGGTTTCGAAAGCTCGTCGTCAGAGAAGCAGGTAGGCGTATCCCTTACCGCCTCCTCTCCGTGGTCGCAGACGATCACGAACATCGACATCAACGCCGTGCGTGTGACTCTCGGCGTCAACGCACTATCTAAGACGGATACCTCAACGGGGAACGTCACGGGTTATCGCGTTGCATACCAAATCCAGCTATCGAAAGATGGCGGCTCGTTCACTACGGTACTCGATACTGCGTTCGATGGGAAAGCGAGTTCGACCTACACGCGCTCCCATCGAATCGAACTCAGCGGCGCGAAGTCACAATACACCGTTCGCGTTGTTCGACTAACCCCGGATGCAACGACGCAGTACGTCCAAGACAAGACGAATATCGTCAGCTATGCAGAACTGATAGACGCGAAGCTCCGATACCCGTTCAGTGCTCTGGTTGCTCTGATGCTGGATGCAGAGCAGTTCTCTAGCATGCCTGTACGTTCCTACGACGTGAAAGGCTTGCTCGTGAAATACCCAAGCAACTACAACCCGCAGACGAGGCAGTACGTCGGCGTGTGGGACGGAACCTTCGTTAGCGGCTGGACGGATAACCCCGCATGGATCTTTTACGACCTCGTGCTCAACAAGCGTTACGGGCTAGGCAAGTATGTAGACGCGACGATGATCGATCGCTATGCGTTGTATCAGATTGCTCAGTATTGCGATGTTCTGGTCTCAGACGGCAAAGGCGGCAAGGAACCGCGCTTTACGTGCAACTGCGCAATCACCTCCCGAGCGGATGCTATCAAAGTCTTGCAAGACCTCGCGAGCGTGTTTCGCGGCATCGCCTATTGGTCGGCGGGAACTGTTGTTGCGTCGTCCGACATGCCCAGCGACCCCGTGTATGTCTATACGGCCGCCAACGTCGTCAACGGCCAATTCAAGTACGTCGGCAGTTCGCTTAAGTCGCGCTACACATCGGCGCTCGTAACGTTCAACGACCCCGACAACGGATACAAGCAGACTGTCGAATACGTAGAAGACGCGGAAGGTATTCGAAGATACGGGCTCAACAAGGCCGAAGTGACTGCCTTCGGTTGCACGAGTCGATCCCAGGCACAACGCGTCGGCCATTGGTTGCTCCTCACGTCCCGCTACGAGACGAACGCGGTTACATTCAGCGTCGGGATGTATGGCACGTTAGCGCAGCCGGGGCAGGTAATCGCGATTGCTGACCCGTCGCGATCAGGAAAGAGAATCGGCGGGCGTATCAAGCAGGCCGCATCCAAGGGGACGGTAACACTCGACCAAGCTCCGGAAGGTGCCGCGCGCGGCGACCGCTTGACGGTAGTTATGCCTAACGGAATGGCCCAGTCTCGCGCAGTTCAGTCCGTTAGCGACTCGATCGTAAGCGTACAGCCCGAATTCGACGTGCAGCCCGCTCCCGGCGCGGTATGGATGCTGGAGACGGCTACTCTCAAATCGCAGCTTTTCCGGGTTACCAGCGTCAGCGAGCGCGAAGGAATCACCTTCGAGATTTCAGCGACGCAGCATGAGCCAGGCAAGTATGACGCTGTGGACAACGGGGCCGCGATTGAGTACCGGCCAATCACCGGAGAAACCTTCAAGGCACAGCGCCCTCCGGCTAACGTCCGCCTCTCTCAATTCGTCGTCATCGATCAAGGCATCGCCCGAACTAACATGACGGTTGCTTGGGACGCCGCCCCCAACGCAACAGCGTACGTCGTGGAATTCCGCAGGGATAACGGAGATTGGATTTCAGCGGGTAGGACTGGCGGGCTATCCCTGGATGTAGGCAACATCTACAGCGGGCGTTACGTTGCACGCGTGCGCGCTGTCAACGCGCTAGACATCTCGTCACCCTTCGCGTACTCGCCGGAAACGCGCCTGAACGGGAAAACGGGTTCTCCGCCCCGCCCTGCTACGCTCGTCGCGACCACGGATCAGGTATTGTCGATCGGGTTGAATTGGTCTTTCCCGCCGAACTCCGGCGACACGTCATACACCGAAGTTTGGTACAGCACGACGCCACGCTTTGCGAATGCTACCCCGCTATCGCGGTATGGCTTCCCGACGAACTCGGCGAGCTTGCTGAATCTGGCGGCGGGCGCATCGCTTTACTTCTGGGCGCGGCTTGTTGATACGTCCGGCAACATTGGTCCGTGGTATCCGGCGGAATCGGAACCCGGCGTGTACGGGGCGGCCACGTCGAACGCAACAGCAATTCTCGCGTACCTCGTCGGCAAGATCACCGATACGGAACTCTCCCAAGAGTTGCTCGGCCCGATCAAAGAGATTCCCGACATCCAGCAGAAAGTAACGGAGAACGCTGCGGCGATTTCTTCGGAACGGCAGGCTCGGATTGACGAGAACGCCGCACTCGCCGGAAAGATCGATAAGGTCTCGGCTCAAATCGTTGTTCCCGACATGGCAGGCAGTTCGGGCGACCTCGCCGGATCGACAACGGTATACGCTGGAGTATGGTCGGAGCAATCCGCGCGCGTAGAGGCGGACCTCGCACTTTCTCGCCGAATCGACACGACGACAGCCCAGCTAAGCAACACACAGCACTCCATACTTTCCGCCGTTCAGACGGAAACCCGCGCGCGTGTAGACGCAGACAGCGCGCAAGCAGAACTCATCACGAAGGTACAGGCGAAGGCCGATGCAAACGCGGCAAACGTCGAGACCGTTGCGAAGTCATACGCGGACCTCAACGGCCGTGTATCGGCGTCGTACAACATCAAGACGCAAGTAACCGTAGATGGCCGCCTATACGTTGCGGGCATCGGTGTAGGCATCGACAACAACAACGGCCAAATCGAGTCGCAAGTCCTCGTAGCCGCGCAGCGATTCGCAGTTGTCGACCCGAACGGCCACACCGTGACTTCCCCGTTCGTGATTCAGGGCGGGCAGGTCTTCATCAATCAGGCGTTCATCGGCGCGGGCTGGATTCAGAACGCGATGATTGGCGACTACATCCAGAGCAACAACTATGTAGCGGGCCGCTCTGGTTGGAGGCTGGACAAGAGCGGATGGTTCGAAATCAACAACACGGACGGACAAGGAAACCGATTGAACATTGACAGTAACGGCTTGCGCGGCTTCGACGCAAACGGCACCCTGCGGTATCGACTGGGGTTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b4b8abf4ee148e2f467eb199b9c76c52f657e2443f6607687820f865f927cac1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8073
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50