Protein

View in Explore
Genbank accession
AAX13237.1 [GenBank]
Protein name
unknown
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSYEKQTWNKYDDLKTEEENIENGAVVTDNRMNHMETGIGDNDANLASHLVDKNNPHKVTATQVGLGNVQNFGLATEDEAKQGISNAKYMTPSLTQAVLSANINSIAYANSADGTDGFTTVYPNLNLLKNTRTLSSTSTTTVWDTLFSSSQIYDSAIKSKSGVSAMNFSFDIHVPLNAIVGSAISIQLKGQSSQAYGNIGTDDYNTIVGSCWYPIKQSDLGKIIRVSSPVELGAKYQSFDSALADTDSITIRQSSNISGFVYSAIKLETGSTATPWMPSASEATINDYPKYVGFSNTVKTNKSASDYTWFPVKDSELTNKVESHINNKANPHAVTASQVGAYSKTEADVKFATGQSLIDLSTTVKGKADDSAVVHKTGDETIGGKKTFTEEIKQKNDVDWTYIPDSSNRAEYMRRGDTVTIRWDFTSTGNYDISLGSLPTDFAPRKRIFKSIPEASATSALHVLQINAFSGGSPGAIILFKATTNAVFLGQESFVVI
Physico‐chemical
properties
protein length:497 AA
molecular weight: 53783,96510 Da
isoelectric point:5,37631
aromaticity:0,08652
hydropathy:-0,36901

Domains

Domains [InterPro]
DC_0782
STR
3–95
DC_0782 IPR054279 DC_0836 G3DSA:6.10.140.2190
SSF69349
STR
359–400
SSF69349
AAX13237.1
1 497
Architecture
STR
STR
STR
STR
STR 3-95 | STR 122-279 | STR 317-340 | STR 359-400 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage TP712
[NCBI] 		314021 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAX13237.1 [NCBI]
Genbank nucleotide accession
AY766464 [NCBI]
CDS location
range 36877 -> 38370
strand +
CDS
ATGAGTTATGAAAAGCAAACTTGGAATAAATATGACGATTTAAAAACTGAGGAAGAAAATATCGAAAATGGTGCGGTTGTTACTGATAATCGTATGAACCATATGGAAACTGGTATTGGTGATAACGATGCTAATCTTGCTTCGCATCTTGTAGATAAAAATAACCCTCATAAAGTTACGGCTACACAAGTCGGGCTTGGCAATGTTCAAAACTTTGGTTTAGCTACAGAAGATGAGGCTAAGCAGGGAATTAGCAATGCTAAATATATGACCCCTAGCCTTACTCAAGCGGTATTATCAGCTAATATTAACTCAATCGCCTATGCCAACAGCGCAGACGGCACGGACGGTTTCACGACTGTTTATCCGAATTTGAATTTGTTGAAAAACACGAGAACTTTATCATCAACTTCAACTACAACAGTTTGGGATACTTTATTTAGTTCCAGCCAAATATATGATTCTGCAATTAAATCTAAATCTGGAGTTTCAGCAATGAACTTTAGTTTCGATATCCATGTGCCATTGAATGCTATAGTTGGAAGTGCAATTTCTATCCAGCTTAAAGGTCAAAGTTCTCAGGCTTATGGAAATATTGGAACTGATGATTACAACACAATTGTAGGTTCTTGCTGGTATCCTATTAAACAAAGCGATTTAGGTAAAATAATTCGTGTAAGTAGTCCAGTAGAATTAGGGGCTAAATATCAGTCTTTTGATAGTGCTTTAGCTGATACTGATAGCATTACCATTAGACAATCATCAAACATATCAGGATTTGTGTATTCTGCCATCAAACTTGAAACAGGCTCAACCGCCACTCCTTGGATGCCCTCAGCTAGTGAAGCCACAATAAATGATTATCCAAAGTATGTAGGATTCAGCAACACAGTTAAAACAAATAAGTCTGCTAGCGATTATACTTGGTTTCCCGTTAAAGATTCAGAACTAACAAATAAAGTTGAATCTCATATCAACAATAAAGCTAATCCGCATGCAGTAACCGCAAGCCAAGTTGGGGCTTACTCAAAAACTGAAGCAGATGTAAAGTTTGCGACAGGACAATCACTGATAGATTTATCAACGACTGTTAAAGGTAAAGCTGATGATTCCGCAGTGGTTCATAAAACTGGTGATGAAACAATTGGCGGTAAAAAAACATTTACAGAGGAAATAAAACAAAAAAATGATGTAGATTGGACATATATCCCAGATTCATCTAATAGAGCTGAGTACATGAGACGAGGAGATACAGTAACGATTCGCTGGGATTTCACTTCGACCGGAAATTACGATATCTCTCTTGGGTCACTTCCAACGGATTTTGCACCAAGAAAAAGAATCTTTAAATCAATCCCAGAAGCAAGTGCTACTAGCGCTTTGCATGTTTTACAAATTAACGCTTTTTCGGGCGGAAGTCCTGGAGCGATTATACTCTTTAAAGCAACAACTAATGCAGTATTTTTGGGTCAAGAAAGCTTTGTGGTAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd68111597e45d628297e594d1c00f9f6a7e62ce8f85e7f99f980c86e0187c22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7836
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lack of the host membrane protease FtsH hinders release of the Lactococcus lactis bacteriophage TP712 Roces,C., Wegmann,U., Campelo,A.B., Garcia,P., Rodriguez,A. and Martinez,B. 2013 24018314 GenBank