Protein

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Genbank accession
YP_009787384.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTGGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPSTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGVDYSGDYIAPAAGSTRGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFSYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVANMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLVVSMDPREGYQLGSEYREAYSDLQKQVQVQGGVFTVPSVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENTIRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITAPCRTNADTTEVSLFTDGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85865,24300 Da
isoelectric point:5,20193
aromaticity:0,08651
hydropathy:-0,23728

Domains

Domains [InterPro]
IPR058003
TTP
5–786
IPR058003
YP_009787384.1
1 786
Architecture
TTP
TTP 5-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009787384.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9927
Central domain 147 345 200 0,1056
C-terminal 346 786 440 0,1108
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KP-Rio/2015
[NCBI] 		1904925 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009787384.1 [NCBI]
Genbank nucleotide accession
NC_047779 [NCBI]
CDS location
range 26997 -> 29357
strand +
CDS
ATGGCTACGTCCCTAGAAGGTACCATTCAGAGCCTGCTGCAGGGCGTCTCTCAGCAGGTTCCAAGAGAGCGCCAGCCCGGGCAACTGGGGGCGCAGCTGAATATGCTCAGCGACCCGGTTTCCGGTATCCGCCGTAGACCACCAGGTGAGATTGTCTGGGAAAGCACAATCGATAACCCTGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGGCGGCAGGCACCTGCTGATTAACACCAGCAACGGCAACTGGTGGTTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGCAATGACCCGTACTTCGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATTGCTGGATTGACTTATATCCTGAATACGGAGATGGCTCCTAGCACAACCGTGGACAATACTGGGCGTATCGACCCCAGCACCACCGGGTTCTTCTACGTTAAATCCGCAGCATTCCAGAAACGCTGGAACGTCACCGTTACCTCTGCAGGGGTAGACTACTCAGGGGACTACATCGCCCCAGCTGCTGGTAGCACACGCGGTAACGCCGAGGAGGTATCTGGTGCTTACGTTGCTCAGCAACTGCGTGACTCTCTTGTAGCGAATGGGTTGCCAGCTGGGAACGTGAGCGTACGTGGCGCGTACCTGTTCTTCTACGGGTTGAGCAACTGCGTGGTATCCTCTGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTTCCAGCGCAAGCTGACGGAGCAATGTGCCGTGTGGGTACCGCCTCGTCTGAGACAGCATGGTACCAGTTCAGCTACAGCACCCGCACCTGGTCTGAGGTGGGGGCGTATGGTAGCATCACTAAGATTACGAACATGCCTAGAGAGCTCGCCGCGGATGACAACATCATCGCGCGGGATTGGGAGGGGCGTTTAGCGGGCAACGACGATAACAATAGTAATCCGGGTTTCGTCGAGAATGGTTATATCACAGGAATCGCAGCTTTCCAGGGGCGCCTGGTTCTGCTTAGCGGCAGCTCTGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCTACTGTGACGTCACTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCCGCCCAGGATTCTGTGTACCGCACTGCTGTGCAGTTCAACCGGGACTTGGTCCTGTTTGCCAACAGCATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACGCCAACTAACGCAAGTATTAGTATTACCAGCACCTACGATTGTGACAGCCGTGTTACCCCGGTAATGGCTGGTCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCGGGTATACTGGAGCTAATCCCATCACCTTACACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCGCCAATATGGCCTTCTCGCGCATGTCTGGGGAGCGCAACAGTCTGCTGGTGTACGAGTTCATGTGGGGTGGAAGTGATGGCGCTAAGATGCAGGCAGCGTGGCATAAGTGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTTGAGGATGAGGTGTTCTTGTACATGCAAGGACCCAGTCCCAGTAACAAGCTCCTGGTTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTAGGCTCAGAGTACCGAGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTACAGGGCGGGGTGTTCACTGTTCCGTCGGTATTGCGCCCGGTTGGGTGGGCGGACAACTACAAGGAAGAGCTTATCTTAACGTACTTGCCCAGCAACCCTATGGGGCCTACCGAGGTTGGCATCAAGGAGATTGCCGGGGAGAACACCATACGGGTTGTGCGTGGCGTACCTGATGGCACTTATGTAATCGGGAGACGTTACCGTAGTACGTTCACGCTAACTACGCCTATTCTACGGGACCAGAATGACAAACTCGTAGGAAGTGGGCACGTGCGCCTGCTGCGCCTGGACGTGGCGGTACGTAACTCTGGGCACTTCGATGTGCAGGTACTCGATACCCCACGGGATGTCAACTGGGGTGGGGAGCTAACTGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGCAGGCTCTGCGTATGGACCTGGCTACGATTACCGCACCATGCCGTACTAACGCAGACACAACCGAGGTGTCACTATTTACTGACGGTTCTATGGAACTGAACGTGCTGGATATATCATACATCCTGCGCTACAACCAACGCAGACGGAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b4d9552b876238055140d1634c335229b53d26b9b51295152e6c4503e8d351ef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8842
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of a novel Klebsiella pneumoniae phage Meira,G.L.S., Campos,F.S., Albuquerque,J.P., Cabral,M.C., Fracalanzza,S.E.L., Campos,R.M., Vermelho,A.B. and Ferreira,D.F. 2016-12-29 — GenBank