Protein

View in Explore
Genbank accession
AUS01249.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,52
Protein sequence
MARDSLSDLINRISNDIQENTSGNITATVMNDLLDYLTNNLYLPTDATVTVNATTGIKSFTFGNGLTVVVDGVAGTAEISVTDNTPVVVFGEMNITTNESNTVTFAVGQTTADDTLLPITAGTTYFEVPGYSGGIQDGLVYDAGNGGLRATVAGTYHFDGWLSCRHTVNNSTVGVVFGVKRGGVIIGTSPRPTPAEMPNADDIGLISGTGLVVLAVDDVVVPLIATQNIGDVTINNSTLVGKLVKAS
Physico‐chemical
properties
protein length:247 AA
molecular weight: 25576,30520 Da
isoelectric point:4,15984
aromaticity:0,05668
hydropathy:0,19595

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.283.C._10N.286.55.A1
[NCBI] 		1881374 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS01249.1 [NCBI]
Genbank nucleotide accession
MG592653.1 [NCBI]
CDS location
range 3836 -> 4579
strand +
CDS
ATGGCACGCGATTCACTCTCAGACCTGATCAACCGTATCAGTAATGACATTCAGGAAAACACGTCAGGTAATATCACCGCTACAGTGATGAACGACCTCCTAGACTACCTCACGAATAACCTATACCTGCCGACTGACGCAACCGTAACGGTTAACGCGACGACAGGTATCAAATCCTTTACATTCGGTAACGGACTTACTGTCGTGGTCGACGGCGTAGCCGGTACGGCTGAAATCAGCGTAACGGATAACACGCCGGTCGTCGTATTCGGTGAAATGAATATCACGACTAATGAATCGAATACCGTAACGTTCGCTGTGGGTCAGACAACTGCAGACGATACGCTTCTACCAATCACTGCGGGTACGACTTACTTCGAGGTCCCAGGGTACTCCGGCGGCATTCAAGACGGTCTAGTGTATGACGCGGGTAACGGGGGTCTACGCGCTACGGTTGCGGGTACTTACCACTTTGACGGTTGGTTATCGTGTCGTCATACGGTGAATAACTCGACGGTGGGGGTCGTATTCGGCGTTAAACGCGGCGGTGTTATTATCGGAACGTCTCCACGCCCTACACCTGCTGAAATGCCTAACGCTGACGATATTGGGTTGATTAGCGGTACGGGATTGGTCGTATTAGCCGTTGACGACGTTGTAGTACCGCTAATAGCAACGCAGAACATCGGTGACGTGACGATTAACAACTCGACGCTAGTTGGTAAGTTGGTCAAAGCGTCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4d09660226198bc3af5db2d6b3d7c5fca1d0616b1a951dd8c5446989bb07300a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank