Protein

View in Explore
Genbank accession
AHB79436.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MVSNGSFKGGGGGQKYAIQIDPNSYDVVVTGNNCNSVGITDDIFTQSRRVIIANNVTRWDPMNDSRVSASGATLSIPSAGDIIQINGAADVNNITIQNSGAYVRGRKVMLRADTANTLILEPGGNINISSAKTIQAGKFVTLFSAGDGKWEVLY
Physico‐chemical
properties
protein length:154 AA
molecular weight: 16227,99220 Da
isoelectric point:7,83080
aromaticity:0,06494
hydropathy:-0,11039

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHB79436.1
1 154
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0067
Central domain 11 143 134 0,4080
C-terminal 144 154 10 0,9941
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-143
C-terminal
144-154

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage pSb-1
[NCBI] 		1414738 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus Sb1
Host Shigella boydii
[NCBI] 		621 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
561198e28886b056d5c2371d81f1d54c92d03730e37320e1e35d244d2b0d1748
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7215
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50