Protein

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Genbank accession
UAJ16989.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MEDSILIIVPQKTYIPGKGMGPINKPYYVDRNTLDYYDLMNIQYVKVNKNEYVDLNSDGEYDVADYFSIEDFIKQKYLQVNEAFKQIKIISTDINNINEKAGEKLNLIKENLIDDDNLNSYLSELDSFKYSIEDKKLDLKSEKEEVISTIEDMNNKLSNMKNTLSDFETVREQFNSNYNNTMSLNDEMEKLSETTNYVKNMENDVVKVEEKLNLIKDKSEELKLAQDSFNSKIEDFENKLLDYKENLKNYMVENAEMYKGDPGMQGPKGDPFKYSDFTEEQLNGLKGDPFEYSDFTQEQLSELKGEKGDPFEYSDFTQEQLDLLKGEKGNPFEYSDFTEEQLNGLKGEKGDTGQIGSQGLQGLPGLDGNYAPTLPITVRKPNDFNYGNEILKNRIVTDGKGTFDVKYDITVNRLTGGTTYYLDSVNGNDSNDGLSNEKPFKSFKVAIPKVNDNDTIMVADGNYFRIGGTLITKAFNKSINIIGTGNNVNIIMADEPSWTLTSDKNRTYEFSRSSTDKVVTLDNSIDIKKVNSIDEVESTPNSWFTDGTKVYSNINDNKPSNSNVIPLISSSNIQLTSLASNIYFENLNIYGGRNCVELNLTSNNSAFFKKCNFYHSASNYNGLAIVGGKDIILDSCKGNYNSFDGLNYHIGADGSKPNIIEINCIGMDNGTDKGLNGVKSNNGSTTHEGLKIIRINGIYGRNDGGNVADVNEGTQSWNLGCIAFESYQGKDFQASSGGNLFLDECIGYGSENSINVGDADSKVYTRGGRYQNKLIVSTEIKY
Physico‐chemical
properties
protein length:782 AA
molecular weight: 87652,93580 Da
isoelectric point:4,59784
aromaticity:0,09719
hydropathy:-0,68619

Domains

Domains [InterPro]
DC_0723
STR
61–549
DC_0723
Coil
Unmapped
136–170
Coil Coil IPR011050
DC_1219
STR
457–776
DC_1219
UAJ16989.1
1 782
Architecture
STR
STR 61-776 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAJ16989.1
1 782
Domain Start End Length (AA) Confidence
N-terminal 1 439 439 0,9929
Central domain 440 771 333 0,9749
C-terminal 772 782 10 0,2163
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-439
Central
440-771
C-terminal
772-782

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauM-UFV_DC4
[NCBI] 		2873946 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAJ16989.1 [NCBI]
Genbank nucleotide accession
MZ779063.1 [NCBI]
CDS location
range 55343 -> 57691
strand -
CDS
ATGGAAGATAGTATACTAATTATAGTTCCTCAAAAAACTTATATTCCAGGTAAAGGTATGGGACCTATAAATAAACCTTATTATGTTGATAGAAATACATTAGATTATTATGATTTAATGAATATTCAATATGTAAAGGTAAATAAAAATGAATATGTTGATTTAAATTCAGATGGAGAATATGACGTAGCTGATTATTTCTCTATTGAAGATTTTATAAAACAGAAATATCTTCAAGTGAATGAAGCTTTTAAACAAATAAAAATAATATCTACTGATATAAATAATATTAATGAAAAAGCAGGAGAAAAACTTAACTTAATCAAAGAAAATTTAATTGATGATGATAATCTTAATTCATATTTGAGTGAGCTAGATAGTTTTAAATATAGTATTGAAGATAAAAAATTAGATTTAAAATCTGAAAAAGAAGAAGTAATTTCAACAATAGAAGATATGAATAACAAATTGAGTAATATGAAAAATACTCTATCTGATTTTGAAACTGTAAGAGAACAATTCAATAGTAATTATAACAATACAATGAGTCTTAATGATGAAATGGAAAAACTTAGTGAGACTACAAACTATGTTAAGAATATGGAAAATGATGTAGTTAAAGTTGAAGAAAAATTAAATCTCATAAAAGATAAATCTGAAGAATTAAAATTAGCACAAGATTCATTTAACAGTAAAATAGAAGATTTTGAAAATAAATTATTAGATTATAAAGAAAATCTTAAGAATTACATGGTAGAAAATGCTGAGATGTATAAAGGTGATCCAGGTATGCAAGGTCCTAAAGGCGACCCCTTCAAATACTCTGATTTTACTGAAGAGCAGTTAAATGGATTAAAAGGAGATCCTTTCGAGTACTCTGATTTTACTCAAGAACAGTTATCTGAGTTAAAAGGTGAAAAAGGTGACCCTTTTGAATATTCTGATTTTACTCAAGAACAATTAGATCTATTAAAAGGTGAAAAAGGAAATCCTTTCGAGTACTCTGATTTTACTGAAGAACAGTTAAATGGATTAAAAGGTGAAAAAGGGGATACTGGACAAATTGGAAGTCAAGGTCTACAAGGTTTACCCGGTCTTGATGGTAATTATGCACCTACACTTCCAATAACAGTTAGAAAACCTAATGATTTCAATTATGGTAATGAAATATTAAAAAATAGAATTGTTACTGATGGAAAAGGCACTTTTGATGTAAAATATGATATAACCGTTAATAGACTTACAGGTGGAACTACCTACTATTTAGATTCTGTTAATGGCAATGATTCTAATGACGGTTTATCTAATGAAAAACCATTTAAATCTTTTAAAGTAGCAATACCTAAAGTCAATGATAATGATACAATTATGGTTGCTGATGGTAACTATTTTAGAATAGGCGGTACATTAATTACAAAAGCATTTAATAAGAGTATTAATATAATAGGTACAGGTAATAATGTGAATATTATTATGGCTGATGAACCTTCATGGACACTAACTTCTGATAAAAATAGAACTTATGAATTTAGTAGATCTTCTACCGATAAAGTTGTAACTCTAGATAATAGTATTGATATAAAGAAAGTAAATAGTATTGATGAAGTTGAAAGCACGCCTAATTCATGGTTTACTGATGGTACTAAAGTTTATTCAAATATTAATGATAATAAACCTTCAAATAGTAATGTAATACCTTTAATATCTTCTTCAAATATACAGTTAACAAGTCTAGCTTCGAATATATATTTTGAAAATTTAAATATATATGGTGGAAGAAACTGTGTTGAATTGAATTTAACTTCAAATAATAGTGCATTCTTTAAGAAATGTAATTTTTATCATTCTGCTTCAAATTACAATGGTCTTGCTATTGTTGGTGGAAAAGATATTATTCTTGATAGCTGTAAAGGTAATTATAATAGTTTTGACGGTTTAAATTACCATATTGGAGCTGATGGTTCTAAACCTAATATAATAGAAATTAATTGTATAGGAATGGATAATGGAACTGATAAAGGATTGAATGGCGTTAAATCAAATAACGGATCAACTACTCATGAAGGTTTAAAAATCATTAGAATAAATGGTATATATGGAAGAAATGATGGAGGTAATGTAGCTGATGTAAATGAAGGTACACAATCGTGGAATTTAGGATGTATCGCATTTGAAAGTTATCAAGGAAAAGACTTCCAAGCTTCATCAGGAGGTAATTTATTCTTAGATGAATGTATAGGTTATGGATCTGAAAATAGTATTAATGTAGGTGACGCTGATAGTAAAGTTTATACTAGAGGTGGAAGATATCAAAATAAATTAATCGTATCTACAGAAATCAAGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ab750d6162fe8914592194c9a4d089419f7e0b6a7c8bfb02b11cb10b9d68edd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6689
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Milk microbial composition of Brazilian dairy cows entering the dry period and genomic comparison between Staphylococcus aureus strains susceptible to the bacteriophage vB_SauM-UFV_DC4 da Silva Duarte,V., Treu,L., Sartori,C., Dias,R.S., da Silva Paes,I., Vieira,M.S., Santana,G.R., Marcondes,M.I., Giacomini,A., Corich,V., Campanaro,S., da Silva,C.C. and de Paula,S.O. 2020 32218514 GenBank