Protein

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Genbank accession
URP86014.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGTTVGGNTIWSQANLPLLPSGNTITYKGFKIYTENDKPTKAEIGLGNVTNDAQVKKAGDDMTGSLNITGANSQLTVPYRLLMKRAANGDPYVLFVRPDNNPVSNGYPSSTLRVMTITARAATTTDPVSGAQLANVLADQTAQGNGSLTLQAFAAPNTTTGASGARTAEIYLNGNGEISFIGSGLNIGMTTRVNGTLFGTQMAIKGDSNRNLFFQDAGGNELGLIYADTGKNLYVRTGGGAYATRFASDGTLVLANHLTVPGQATFNGLGVFNNRASVGVDYDSQGTNSAILRIDTSGDGNAVGDGVTHFGYKDSNGRYNHYFRGTGSTFINTKLGLNVNVPSYYNDVPQGTPAQYFLPTVGQGGKNYLRQFRGGNADTIWHETVQGGTYRLATGSTDAQEELQISTAGYIRGRNEIQSASCGSGGQFRAVQGNYGFFIRNDGGNTYFMLTESGNPYGAWGDLRPLVISNGTGTVSMNNGVNVGGGLDVSGATKFSNGIGCGTPNGLGANAISLGDTDTGFVQEGDGILNAYANSQRIQRWTTGATAVYKQLQVQGINGPALLLNNTASNQSVYMLLQYAGSNAGYLGFGGSDNTMSMHNYQTNTTIQLRTSDLYMNRALYGESTGNFTDVYIRSDRRLKSNLVEIKDALFKVEQLTGYVYDKQSKDADEIVYHRESGLIAQDVQEVLPDAVKEDHNSGMLTISPAGVNALLVNAINELRERLEAIENKLGA
Physico‐chemical
properties
protein length:737 AA
molecular weight: 78190,61190 Da
isoelectric point:5,64908
aromaticity:0,08412
hydropathy:-0,33406

Domains

Domains [InterPro]
DC_0188
STR
1–737
DC_0188
IPR048390
ATT
411–473
IPR048390 G3DSA:6.20.80.10 IPR030392 Coil
URP86014.1
1 737
Architecture
STR
ATT
STR
STR 1-410 | ATT 411-473 | STR 474-737
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URP86014.1
1 737
Domain Start End Length (AA) Confidence
N-terminal 1 85 85 0,7391
Central domain 86 284 200 0,2953
C-terminal 285 737 452 0,8211
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-85
Central
86-284
C-terminal
285-737

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EC-F1
[NCBI] 		2662272 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URP86014.1 [NCBI]
Genbank nucleotide accession
MN508623 [NCBI]
CDS location
range 47306 -> 49519
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCGTTGGCGGTAATACTATCTGGAGTCAGGCGAACTTGCCTTTGCTCCCTTCTGGAAACACAATCACATATAAAGGCTTTAAAATCTACACCGAAAACGATAAGCCAACAAAGGCAGAAATCGGATTAGGCAACGTAACGAACGATGCACAGGTGAAGAAAGCTGGCGACGATATGACCGGATCGTTGAACATTACGGGCGCAAACAGTCAATTAACTGTTCCGTATCGCCTCCTGATGAAACGAGCGGCAAATGGCGATCCCTATGTGTTGTTTGTACGTCCAGACAACAACCCTGTATCAAACGGCTATCCGTCAAGCACTCTTCGAGTAATGACTATCACTGCCCGTGCCGCAACTACAACAGATCCGGTTTCTGGTGCTCAATTGGCTAACGTATTAGCAGATCAGACAGCACAGGGTAACGGATCACTAACATTGCAAGCATTTGCAGCCCCAAATACAACCACAGGCGCAAGCGGTGCGCGAACAGCAGAGATTTACCTAAACGGCAACGGTGAAATATCTTTTATCGGAAGTGGGCTGAACATTGGCATGACAACCAGGGTCAATGGTACTTTGTTTGGTACACAAATGGCAATCAAAGGAGATTCTAACCGAAATCTGTTCTTCCAGGATGCTGGCGGTAATGAACTCGGTTTGATCTATGCCGATACAGGAAAGAACTTATATGTTCGTACTGGTGGCGGTGCATACGCAACCAGATTTGCATCTGATGGAACTTTAGTTCTCGCTAACCATCTAACTGTTCCTGGACAGGCTACATTTAATGGTCTGGGTGTGTTCAATAACCGTGCTTCTGTAGGCGTAGATTACGATTCACAAGGAACAAACTCAGCAATCCTTCGTATTGATACAAGCGGGGATGGAAACGCAGTTGGTGATGGTGTTACTCACTTTGGATATAAAGACAGCAACGGACGATACAACCATTATTTCCGTGGTACTGGTTCGACTTTCATCAACACCAAATTAGGTCTTAACGTAAACGTACCATCGTATTATAACGACGTTCCACAGGGCACACCAGCACAATATTTCTTGCCTACTGTTGGTCAGGGCGGGAAAAACTATTTGCGTCAGTTCCGAGGCGGTAACGCGGACACAATCTGGCATGAAACTGTTCAGGGCGGTACTTATCGTTTAGCAACAGGTAGCACTGATGCGCAGGAAGAATTGCAGATCTCTACTGCTGGTTATATTCGAGGTCGTAACGAAATTCAATCGGCATCATGTGGTTCTGGTGGACAGTTCCGCGCGGTACAAGGAAACTATGGATTCTTTATCCGAAATGATGGTGGTAACACCTATTTCATGCTTACTGAATCTGGAAACCCTTACGGCGCATGGGGTGATCTTCGCCCGTTGGTGATTAGCAACGGCACTGGTACTGTGTCTATGAACAACGGTGTTAACGTTGGTGGTGGTTTGGATGTAAGCGGCGCTACTAAGTTCAGCAATGGTATCGGTTGTGGTACTCCAAACGGATTGGGCGCAAACGCGATATCACTAGGTGATACTGATACTGGTTTTGTTCAAGAAGGCGATGGTATTCTCAACGCTTATGCAAACAGTCAACGAATCCAACGATGGACAACGGGGGCTACAGCAGTCTATAAGCAGTTGCAGGTTCAGGGTATTAACGGGCCAGCATTGCTTCTGAATAACACAGCAAGCAATCAGTCTGTATATATGCTGTTGCAATATGCAGGTAGTAACGCGGGTTATTTGGGTTTTGGTGGTTCTGATAATACCATGTCAATGCACAACTATCAGACGAATACAACGATACAATTACGTACTTCCGATCTGTATATGAACCGTGCATTATATGGTGAAAGTACAGGCAACTTTACCGATGTGTATATTCGTTCGGATCGCCGTCTGAAATCAAATCTGGTTGAGATCAAAGACGCTCTGTTTAAAGTAGAACAGCTTACGGGCTATGTATACGATAAACAATCAAAAGACGCTGATGAAATTGTATATCACCGTGAATCGGGGTTGATTGCGCAAGATGTTCAGGAAGTATTGCCTGATGCAGTCAAAGAAGATCATAACTCAGGTATGCTTACGATTTCTCCTGCTGGCGTTAACGCGCTTCTGGTCAACGCAATTAACGAACTGCGCGAACGTCTGGAAGCAATCGAAAACAAATTAGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
02d6e5fcc5f38b420e12e10ac4220cc65bded0132d555fa520a17c5dd3d175ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6265
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Constructing and Characterizing Bacteriophage Libraries for Phage Therapy of Human Infections Gibson,S.B., Green,S.I., Liu,C.G., Salazar,K.C., Clark,J.R., Terwilliger,A.L., Kaplan,H.B., Maresso,A.W., Trautner,B.W. and Ramig,R.F. 2019 — GenBank