Protein

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Genbank accession
USN15483.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDPFSFAIMTVAQIGIGFLFPAEGPRLKDLKVAASTYGAAIPNAYGVVRVAANMIWTDKIREHKKKKRVGLKRYKYYLYTGTFAMAMCRGPIANVRKIWANHKLIYDATGTGTLAIKKKFNIKIYKGDEDQQPDPTIEKIVGEGNTPAYRGLSYLLFEDMPLEDFGNSIPQISVELYAVGDGEGSSIGRVTRMDFRQATSYQTDEVVYNGDLDMVVAGLTYSGMAVLRPSSGKEENRSGHTKKEFQAVLGISPTTGNIVVQSHGLYTGSSSFYLYEPVNWSVVGSFGRVADPDGEYPSMAREGAFCVDRSGTEWCFYTSLFGTHHAFQTTAFGMGGLASAGSRPNGYYGSSAYIGVSGLEKPTFYVFEGGDMSGGVVSALQLRRVEGAGSVWSPSTIMTIPNTENRAGFEVEQCHYDPTDQGLLLVWRDNSTRHMGKYRPAESRWAWRRSGFTPAVAYVNSTVLTRGEFWWVANNRLWRMNAATGEYLRDTFDPFMGLLDTDSVPQSVIDSAVANAPYTGEVLYDQDNKPVTGFTASTQQHIDPANEQIILYGTGTGGGFRVVRRAIMVKDESTTLAGLVSLLLSRAGLGPQDYDVTALKVQPIRGYGWANFSDLRGILAQLRMLFMFDLIERDGRLVGVMRATGSNEDRTGQPVRRITSRLLGSTGDGGGTDFWKESRIQDADLPRRVALSYMNWERDFETSTALTKRITSPSPTMFSFQQVSMEIGVVMTPKEAKDQVNKILWSQWAERTEHETAVPWAYIDLDPADIVDVQFDDGRRYRERLQEMEFGANWALRLESITQDSIAYESDAKADGGTGGPPQLPYIPPRAAKAVVLNTPLLRDQDDTGGAYSLYYTGVAHGGLVPFDGASMYRSTDNAFYEMLYVTDQSVEWATVAGVTPPPRHGAFGLDWETRITVWPVIDWFELESITDDELWAGQNLCAVGDELIQFRDCVQNLDGSWTIWNLLRGRRGTEYACTAHRTGEMFVYLSSSTFEGDAEALDQRGRSRWFRSVADGISPDLSPATQIFYEPRDLMPYAPKDIRRSVAGSAINLSWKRRTRMGGNMQDGTGSVPLNEGREWYEVYILKTPFLGDLSRSDDAPIDSNVLFRLETAQSEITLETTEFTAPFDVNLDTLHVLIYQHSTAVGRGFPAVRSIESWQDF
Physico‐chemical
properties
protein length:1163 AA
molecular weight: 129320,77500 Da
isoelectric point:5,22034
aromaticity:0,11092
hydropathy:-0,32700

Domains

Domains [InterPro]
DC_1879
ATT
1–235
DC_1879 IPR032876 IPR056490 DC_0263
DC_2254
STR
648–891
DC_2254
USN15483.1
1 1163
Architecture
ATT
ATT
STR
RBD
ATT 1-235 | ATT 616-788 | STR 789-891 | RBD 902-1160 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USN15483.1
1 1163
Domain Start End Length (AA) Confidence
N-terminal 1 281 281 0,6146
Central domain 282 541 261 0,6285
C-terminal 542 1163 621 0,0905
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-281
Central
282-541
C-terminal
542-1163

Taxonomy

  Name Taxonomy ID Lineage
Phage Brevundimonas phage vB_BpoS-Kikimora
[NCBI] 		2948601 Uroviricota > Caudoviricetes > Jeanschmidtviridae > Kikimoravirus kikimora >
Host Brevundimonas pondensis
[NCBI] 		2774189 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USN15483.1 [NCBI]
Genbank nucleotide accession
ON529857 [NCBI]
CDS location
range 197867 -> 201358
strand -
CDS
ATGGACCCGTTTTCGTTCGCCATCATGACGGTGGCGCAGATCGGCATCGGGTTCCTTTTCCCGGCCGAAGGCCCTCGCCTGAAGGATTTGAAGGTTGCCGCCTCGACGTATGGGGCGGCGATCCCTAACGCCTATGGCGTGGTTCGTGTCGCTGCGAACATGATCTGGACCGACAAGATCAGGGAGCATAAGAAGAAAAAGCGCGTCGGTCTGAAGCGCTATAAGTATTATCTTTACACGGGCACATTCGCTATGGCGATGTGCCGAGGCCCTATCGCCAATGTGCGGAAAATCTGGGCCAACCACAAGCTGATCTATGACGCCACGGGAACTGGAACCTTGGCGATCAAGAAAAAGTTCAACATCAAGATTTACAAGGGCGACGAAGACCAACAGCCCGATCCGACGATTGAGAAAATCGTGGGGGAAGGCAACACGCCTGCTTATCGTGGTTTGTCTTATCTGTTGTTCGAAGACATGCCGTTGGAAGACTTCGGCAACTCGATCCCGCAGATCAGCGTCGAACTCTATGCGGTCGGAGACGGGGAAGGGTCCTCTATTGGTCGCGTGACGCGGATGGATTTCCGACAGGCGACCAGCTATCAGACGGATGAGGTCGTCTATAACGGGGACCTGGATATGGTCGTCGCAGGATTGACCTACAGCGGCATGGCGGTGCTGCGCCCGTCCAGCGGTAAGGAGGAAAATCGCAGCGGCCACACCAAGAAGGAATTCCAGGCGGTTCTGGGCATCTCGCCTACGACCGGCAACATCGTGGTTCAATCCCACGGGCTCTATACGGGCTCCAGCAGCTTTTACCTGTACGAGCCGGTGAATTGGAGCGTTGTGGGGAGCTTCGGCCGGGTAGCCGACCCCGACGGCGAATATCCTTCCATGGCCCGCGAAGGCGCGTTCTGTGTCGATCGCTCCGGGACGGAATGGTGCTTCTACACTTCTCTGTTCGGTACACACCACGCGTTCCAGACCACGGCGTTCGGCATGGGCGGGTTGGCCTCAGCGGGATCGCGCCCCAACGGATACTACGGCAGTTCCGCCTATATCGGCGTGTCCGGACTGGAGAAGCCGACCTTCTACGTGTTCGAGGGCGGGGATATGTCCGGCGGCGTTGTCTCGGCCTTGCAGCTGCGCCGGGTTGAAGGCGCGGGCTCGGTCTGGTCGCCCTCGACGATCATGACTATTCCCAACACGGAAAACCGTGCCGGATTTGAAGTCGAGCAATGCCACTATGATCCAACTGATCAGGGTCTATTGTTGGTCTGGCGCGACAACAGCACCCGTCATATGGGTAAGTATCGCCCGGCGGAGTCGCGGTGGGCCTGGCGCCGGTCGGGTTTCACGCCGGCGGTCGCCTATGTGAACTCGACGGTGCTGACGCGCGGAGAATTCTGGTGGGTCGCCAACAACCGCCTCTGGCGGATGAACGCGGCGACCGGAGAATACCTGCGCGACACGTTCGATCCCTTCATGGGCCTGCTGGATACGGACAGCGTGCCTCAGTCGGTGATCGATTCCGCTGTCGCCAACGCGCCCTATACGGGCGAAGTGCTTTACGATCAGGACAACAAGCCGGTGACCGGGTTCACCGCTTCGACGCAACAGCACATCGACCCCGCCAATGAGCAGATCATCCTTTACGGCACGGGCACCGGCGGTGGGTTTCGCGTTGTGCGCCGCGCCATCATGGTCAAGGACGAATCCACCACTTTGGCGGGCCTGGTGTCCTTGCTTCTGTCGCGGGCGGGGCTTGGGCCGCAGGACTATGATGTGACCGCGCTCAAGGTCCAGCCCATTCGCGGCTATGGTTGGGCCAACTTCTCCGACCTGCGCGGTATCCTGGCGCAGCTGCGGATGCTCTTCATGTTTGACCTGATCGAGCGTGACGGGCGGCTGGTGGGCGTGATGCGGGCTACGGGGTCCAACGAGGACCGGACCGGGCAACCGGTGCGGCGGATCACCAGTCGGCTGCTGGGCTCCACCGGCGACGGCGGGGGCACGGACTTCTGGAAGGAAAGCCGCATCCAGGACGCCGACCTGCCGCGCCGCGTGGCGCTTTCCTACATGAACTGGGAGCGGGACTTCGAAACCTCGACCGCCTTGACCAAGCGGATCACGTCGCCGTCTCCGACCATGTTCTCTTTCCAACAGGTCTCCATGGAGATCGGCGTGGTGATGACGCCGAAGGAAGCCAAGGATCAGGTCAATAAAATCCTGTGGTCTCAGTGGGCGGAGCGGACCGAACACGAGACGGCCGTTCCGTGGGCCTACATCGATCTGGACCCGGCGGACATTGTCGATGTCCAGTTCGATGACGGCCGACGCTATCGCGAGCGCTTGCAGGAAATGGAGTTCGGGGCGAACTGGGCGTTGCGCCTGGAGAGCATCACCCAGGATTCGATCGCCTATGAAAGCGATGCAAAAGCGGACGGGGGAACGGGCGGACCGCCGCAGTTGCCCTATATCCCGCCGCGCGCCGCCAAGGCCGTCGTGCTGAACACGCCGCTGCTGCGGGACCAGGACGATACGGGCGGAGCCTATTCGCTCTACTACACCGGCGTCGCCCATGGCGGCCTGGTGCCGTTTGACGGCGCGTCGATGTATCGCTCCACCGACAACGCCTTCTACGAGATGCTCTACGTCACGGATCAATCCGTCGAATGGGCGACCGTGGCCGGCGTGACGCCGCCTCCGCGTCATGGCGCCTTCGGCCTTGACTGGGAAACTCGAATCACCGTGTGGCCGGTGATTGACTGGTTCGAGCTGGAATCGATCACCGATGACGAACTCTGGGCGGGCCAGAACCTGTGTGCGGTCGGCGACGAGCTGATCCAATTCCGCGATTGCGTGCAAAACCTGGATGGATCGTGGACGATCTGGAATCTGCTTCGCGGCCGGCGCGGGACCGAATACGCTTGCACGGCTCACCGGACCGGAGAGATGTTCGTCTATCTGTCGTCCTCGACCTTTGAGGGGGACGCAGAGGCGCTGGATCAACGCGGTCGTTCGCGTTGGTTCCGTTCCGTGGCGGACGGAATCAGCCCTGATCTTTCGCCCGCGACCCAAATCTTCTACGAGCCACGCGACCTCATGCCCTACGCGCCGAAGGACATTCGACGCAGCGTCGCCGGCTCCGCCATCAACCTGTCTTGGAAGCGGCGAACGCGGATGGGTGGGAACATGCAGGACGGCACAGGTTCTGTGCCGCTGAACGAAGGGCGTGAATGGTATGAGGTCTACATTCTCAAGACGCCATTCCTGGGCGATCTGTCTCGCAGCGATGACGCGCCGATTGACAGCAATGTCCTTTTCCGGCTCGAAACCGCACAATCCGAGATCACGTTGGAAACGACGGAATTCACGGCGCCTTTCGATGTAAATCTTGACACCCTCCATGTTCTGATTTATCAACATTCCACGGCGGTTGGTCGCGGCTTCCCGGCCGTGCGCTCGATCGAGTCCTGGCAGGACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc3dd2fecfcfdfffaae8963caf409bd750dc89a7eaf29aa9e5ff99256e2f1fbc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2744
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50