Protein

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Genbank accession
URY11118.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTIKTVMTYPLDGSTTDFNIPFEYLARKFVRVTLIGVDRKELILNQDYRFATKTTISTTRALGPADGYTLIEIRRFTSTTDRLVDFTDGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNVADAQDVGDAVNLGQIQRWNDSALNSANRAKQEADRATARANDANNSANASASSASSSAGSAEVAKRWATSDTVVESDLESSRTYALHSMLYRNEAKGAADSAKTSEANAKASESNAKNSETNAKSSEVKAKASEERAIEEASKLGNMNDFAAAIDSVDGNHVNMKGNIKTPGNITGGGLIATGDARVTGTIAAGEFSTLGKEVTINQRTSDWRVPLYTWKALNLRNDLVQELRDNGGSDHYNHLYRLHIDNRPVHVGNRQGLHIGWNENTNGESNFINNRGGGGGGFIFRTVNNENTVETGRVTFTGGGQVHANHFQAANGARIEANNNIVGQNLYAGMGNAALGPDGNLSGGVWSGVGGSLWSCLNDRYQFAKPPAGVRLYTARGGDYLEGNVDGNSVGFRWFLSDRRLKENLKVVRSADDMLNIIRSYIPVSYKYKDSEYVDNRGKTVTITGKNSRAGFITQDLIRIWPEAVDVMSDGMQSPDPNQIIGGLMLLVKNLDERVQALESKSTTD
Physico‐chemical
properties
protein length:653 AA
molecular weight: 70798,36400 Da
isoelectric point:6,02314
aromaticity:0,06738
hydropathy:-0,51440

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil IPR030392
DC_0657
STR
1–636
DC_0657
IPR030392
CHP
545–613
IPR030392
URY11118.1
1 653
Architecture
ATT
STR
CHP
ATT 1-131 | STR 132-636 | CHP 637-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URY11118.1
1 653
Domain Start End Length (AA) Confidence
N-terminal 1 213 213 0,8840
Central domain 214 412 200 0,5785
C-terminal 413 653 240 0,8349
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-213
Central
214-412
C-terminal
413-653

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ESh12
[NCBI] 		2950759 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URY11118.1 [NCBI]
Genbank nucleotide accession
ON528724.1 [NCBI]
CDS location
range 20318 -> 22279
strand +
CDS
ATGGCTACAACTATTAAGACCGTGATGACTTACCCGCTGGATGGCTCCACTACGGACTTCAATATTCCGTTTGAGTATCTGGCTCGTAAGTTCGTCCGAGTGACACTTATCGGCGTTGACCGAAAGGAACTCATCTTGAATCAAGACTATCGTTTTGCGACTAAGACCACAATCTCCACAACGAGAGCATTGGGGCCAGCGGACGGTTATACTTTGATTGAAATCCGTCGATTCACCTCCACTACAGATCGTCTGGTTGACTTTACCGACGGCTCTATCCTGCGGGCATATGATTTGAACATATCTCAGGTTCAGACCCTTCACGTTGCTGAGGAAGCCCGTGACCTTACCGCTGATACAATTGGCGTTAACAATGATGGGAACTTGGATGCTCGTGGTCGTCGTATCGTTAACGTTGCGGATGCGCAAGATGTAGGTGATGCAGTCAACTTAGGTCAAATCCAACGGTGGAACGACTCTGCGTTGAACTCTGCGAATCGAGCGAAACAGGAAGCTGACCGTGCGACCGCTCGTGCAAACGATGCGAACAACTCTGCGAACGCATCTGCAAGCTCTGCAAGCTCTTCTGCTGGGTCTGCTGAGGTGGCGAAACGATGGGCTACCAGTGATACAGTAGTTGAGAGTGACCTTGAGTCTTCTCGAACCTACGCGCTTCACTCCATGTTATATCGGAATGAGGCTAAAGGTGCAGCCGACAGCGCAAAAACTTCTGAGGCCAATGCGAAGGCTTCCGAAAGTAACGCGAAGAACTCTGAGACCAACGCTAAGTCCTCTGAGGTCAAAGCCAAGGCTTCTGAGGAACGAGCCATTGAGGAAGCCAGTAAGTTGGGCAATATGAATGACTTCGCGGCTGCGATTGATAGTGTGGATGGTAATCATGTGAATATGAAGGGAAACATTAAAACTCCCGGTAATATCACAGGTGGTGGCCTAATCGCTACCGGAGATGCCCGCGTTACCGGTACGATTGCTGCTGGTGAGTTCAGCACGCTAGGTAAGGAGGTCACTATAAATCAACGAACTAGTGACTGGCGTGTTCCACTGTATACATGGAAAGCCCTAAACTTACGTAACGACCTAGTTCAAGAGTTGCGCGATAATGGCGGCTCTGATCACTATAACCATTTATACCGCCTTCATATAGACAACCGACCTGTCCATGTAGGTAATAGGCAAGGATTACATATAGGGTGGAATGAGAATACCAACGGTGAATCTAACTTCATCAACAACCGTGGTGGCGGCGGTGGTGGTTTCATCTTCCGAACGGTGAACAATGAGAACACTGTAGAGACTGGAAGGGTGACTTTCACCGGAGGTGGTCAGGTTCACGCCAACCACTTCCAAGCCGCCAACGGTGCCCGAATTGAGGCGAACAACAACATCGTTGGTCAGAACCTCTACGCAGGAATGGGCAACGCGGCACTTGGCCCGGATGGGAACCTTAGCGGTGGCGTATGGAGTGGAGTAGGTGGCTCTTTATGGTCTTGCTTGAATGACCGATACCAGTTCGCCAAGCCTCCTGCTGGGGTTAGACTGTACACCGCCCGTGGTGGAGACTACCTAGAGGGTAACGTTGATGGTAACTCAGTTGGTTTCCGCTGGTTCCTGTCTGACAGAAGGCTTAAAGAGAACCTCAAGGTTGTTCGCTCTGCTGATGATATGCTCAATATTATCCGCTCATATATTCCGGTTTCCTACAAATATAAGGACTCTGAGTACGTTGACAACCGTGGGAAGACTGTTACTATCACTGGTAAGAACTCTCGTGCTGGTTTCATTACTCAGGACTTGATTCGAATCTGGCCAGAAGCGGTTGACGTAATGTCAGATGGGATGCAGTCTCCAGACCCTAACCAGATTATTGGCGGACTGATGCTGCTTGTTAAGAACCTAGATGAACGTGTTCAGGCGCTTGAATCGAAGAGCACGACAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5aa451002303b7cca70755dacd70657253a87bcfe77031d0797db80f7e8112d6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6315
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of a bacteriophage cocktail active against Shigella species and testing of its therapeutic potential in Galleria mellonella Filippov,A.A., Su,W., Kevorkian,R.T., Sergueev,K.V., Srijan,A., He,Y., Lurchachaiwong,W., McGann,P.T., Ellison,D.W., Swierczewski,B.E. and Nikolich,M.P. — — GenBank