Protein

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Genbank accession
AEF56793.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAEIKTGILLRRNLKKHFVNDAKPTQGEIVLATDTNEIGMLVNDEIQWTPIQGVVNTVAGKQGDVVLNKKDVGLENVDNTADIDKPISNSTKLEFQRHYTAENPHNITKKTLGLENVDNTADIDKPISNLTQIELNKKISWDDARKQAGGKDPVFTDTTYVIADGQLSEFNFNSYYKNFIDTFNTNSRVLPSIQALTVNGRTITLRRADGSSESIETQDTLYDDSELRALIEQAKIDLHINIQDNLESDSTQDALSANQGKVLKGLIDEIKKVINITDDDFRNLQDIINYIEENREKFDDLTIANIKGLQVALDSKLNRDDSTYVAPNSALLESHPASDFVLNENYNAKLIEIQDSLNSINSQIKLFETQAGVDSKINQAIRDLNFTETIQSINEQITRLQGSLDDIDLDAITENLQRVQQDLTSKIEQLETNTSKKLEEFEAIVNNFDMTEIQTSINNFKDQINQNIDSIQGVVDSVSESLSNVENNIQTSLENKVSKDELAAEVQTINSNIADLSNIANEAKWQDNFYSKDARRRQALWSIISISKDNFKGSYKKPNTYNYWEAKYKNLKYINDNFDSLETITNIPTFETMTSQVIRLTFNNISQAKFLIGSPKNKIQIAKIIAVNANTKKAVFIYGYPSFMTDDLSKIMVTIEKDSSFGNYLSRANKTSPETFQKIVTAQEFNLPDDTDDYSYFEASYEISGNVITLTIPGDMFLEFYGNMTAVETTITGSSASEVWVTTLKSTNYEGNKLFSNGVIVGSNPRGEILTIYGDKSTYINDLDEARTNYNDFQIIREEYEDIMYTRDFLPGTVGPGDGDLEW
Physico‐chemical
properties
protein length:823 AA
molecular weight: 92728,82100 Da
isoelectric point:4,54612
aromaticity:0,08019
hydropathy:-0,52260

Domains

Domains [InterPro]
DC_0351
STR
2–93
DC_0351 DC_1597
IPR054500
STR
242–269
IPR054500 G3DSA:1.20.120.20
Coil
Unmapped
343–363
Coil Coil Coil
AEF56793.1
1 823
Architecture
STR
STR
STR 2-93 | STR 98-807 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage vB_CcoM-IBB_35
[NCBI] 		2920889 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEF56793.1 [NCBI]
Genbank nucleotide accession
HM246720 [NCBI]
CDS location
range 40619 -> 43090
strand +
CDS
ATGGCTGAAATAAAAACAGGTATTTTATTAAGACGTAATCTTAAAAAACATTTTGTAAATGATGCAAAACCAACACAAGGTGAAATCGTTCTTGCTACCGATACAAATGAAATTGGTATGCTTGTAAACGATGAAATACAATGGACTCCTATTCAAGGTGTCGTTAACACAGTTGCTGGTAAGCAAGGTGACGTCGTACTAAACAAAAAAGACGTAGGGCTTGAAAACGTTGACAACACTGCTGATATTGATAAGCCAATTTCTAATTCTACAAAATTAGAATTTCAAAGACATTATACAGCCGAAAACCCACACAATATTACAAAGAAAACACTTGGTTTAGAAAACGTTGATAATACTGCTGACATTGATAAGCCAATTTCTAACTTGACTCAAATTGAGTTAAATAAGAAAATTTCTTGGGATGATGCTAGAAAGCAAGCCGGTGGAAAAGACCCAGTTTTTACAGATACTACTTATGTCATTGCAGATGGCCAACTTTCCGAATTTAACTTTAATTCATATTATAAGAATTTTATAGATACTTTTAATACTAACTCCAGAGTTTTACCAAGCATACAAGCTCTTACCGTTAATGGTAGGACGATAACCTTAAGAAGAGCTGATGGCTCGAGTGAAAGTATAGAAACCCAAGATACTTTATATGATGATTCTGAACTTAGAGCATTAATTGAACAAGCTAAAATAGATTTACATATAAACATACAAGATAATTTAGAATCAGATTCTACTCAAGATGCTTTGAGCGCCAATCAAGGTAAAGTTCTTAAAGGTTTAATAGACGAAATAAAGAAAGTAATTAATATTACAGATGACGATTTTAGAAATCTTCAAGATATTATTAATTATATAGAAGAAAACCGCGAAAAATTTGATGATTTAACAATTGCTAACATCAAAGGCTTGCAAGTTGCTTTAGATTCTAAATTAAATAGAGATGATTCTACATATGTTGCACCAAATTCTGCATTATTAGAATCTCACCCAGCTAGTGATTTTGTATTAAATGAAAATTATAATGCTAAGTTAATAGAAATACAAGATTCTTTAAATTCTATCAATTCACAAATTAAATTATTTGAAACACAAGCCGGTGTAGATTCTAAAATAAACCAAGCAATCAGAGATTTAAATTTCACTGAAACTATACAGAGTATCAATGAACAAATTACAAGACTACAAGGATCTTTAGACGATATTGATTTGGATGCTATAACAGAAAATCTCCAAAGGGTTCAACAAGATTTAACCAGCAAGATAGAACAATTAGAAACTAATACATCTAAAAAATTAGAAGAATTTGAAGCTATTGTTAATAATTTTGATATGACTGAAATACAAACTAGTATTAATAATTTTAAAGACCAAATTAACCAAAATATTGATAGTATACAAGGTGTTGTTGATTCTGTTTCTGAATCATTATCAAACGTTGAAAATAATATCCAAACCAGTTTAGAAAATAAAGTTTCAAAGGATGAATTAGCTGCTGAGGTTCAAACTATTAATAGTAATATTGCTGATTTATCAAACATAGCAAATGAAGCAAAATGGCAAGATAATTTTTATAGTAAAGATGCCAGAAGACGCCAAGCTTTATGGTCAATTATATCAATTTCAAAAGACAATTTCAAAGGTTCATATAAAAAACCAAATACCTATAATTACTGGGAAGCAAAATATAAAAATCTTAAATATATTAATGATAATTTTGATAGTTTGGAAACAATAACCAATATACCTACATTTGAAACTATGACGAGCCAGGTTATTAGATTAACTTTTAATAACATTTCACAAGCAAAATTTTTGATTGGTAGTCCTAAGAATAAAATACAAATAGCTAAAATTATAGCAGTAAATGCTAATACTAAAAAAGCTGTGTTTATATATGGATATCCTAGTTTTATGACAGACGATTTATCAAAAATTATGGTAACTATAGAAAAAGATTCAAGTTTTGGTAATTATCTATCAAGAGCTAATAAAACATCTCCAGAAACTTTTCAAAAAATTGTAACTGCGCAAGAATTTAATTTACCAGACGATACTGATGATTATTCATATTTTGAAGCTAGTTATGAAATATCTGGAAATGTGATAACATTGACTATACCAGGAGATATGTTTTTAGAATTCTATGGTAATATGACAGCAGTAGAAACGACCATTACTGGTTCTAGTGCATCGGAAGTTTGGGTGACGACTTTAAAATCCACTAATTATGAAGGTAATAAATTATTCTCAAATGGTGTAATAGTAGGAAGCAACCCACGGGGCGAAATCTTAACTATATATGGTGATAAATCAACATACATAAATGACTTAGATGAAGCTAGAACTAATTATAATGATTTTCAAATAATACGGGAAGAATACGAAGATATTATGTATACGAGGGATTTTTTACCAGGAACTGTAGGACCAGGCGACGGCGACCTAGAATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16e9d6524c98b9b868d24a146002c85d30778ca083e669f4f5744f9387427c65
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3159
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genome and proteome of a Campylobacter coli bacteriophage vB_CcoM-IBB_35 reveal unusual features Carvalho,C.M., Kropinski,A.M., Lingohr,E.J., Santos,S.B., King,J. and Azeredo,J. 2012 22284308 GenBank