Protein

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Genbank accession
YP_006589986.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSLKLTNNAVSKLASSVAADATTVAVLPGDGTKFPALAAGDWFPGTLIKVDGSSEIVKVTARAIDSFTVVRAQEGTAALDFNAGDRFELRITAFAAQNTSDIAPSLANLDRTVNLRSLYQIFDLLEPIGTVKYWDSDAPPPPGYFICNGQNGTPDWRDRFIVVAGASYARGATGGANTVTLAPEQMPVHNHGLHDPGHAHGVADPGHNHYVNDPGHAHGFKVVAYSIDGGGSGQLTGGGYQSPNDGEFNGVTNGSGTGIWLNGSGTGISIYGSGTGIWLDNAGGGQAHENRPPYVAIPIIRKMVTALSTLG
Physico‐chemical
properties
protein length:311 AA
molecular weight: 32266,43450 Da
isoelectric point:5,60537
aromaticity:0,08039
hydropathy:-0,13955

Domains

Domains [InterPro]
DC_0891
STR
1–310
DC_0891
SSF88874
STR
126–298
SSF88874
cd22641
STR
127–192
cd22641
YP_006589986.1
1 311
Architecture
STR
STR 1-310 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage DC1
[NCBI] 		2881398 Uroviricota > Caudoviricetes > Lessievirus >
Host Burkholderia cepacia
[NCBI] 		292 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006589986.1 [NCBI]
Genbank nucleotide accession
NC_018452 [NCBI]
CDS location
range 35395 -> 36330
strand +
CDS
ATGAGCCTGAAACTGACCAACAACGCCGTGAGCAAGCTGGCGTCATCAGTTGCGGCAGACGCCACGACTGTCGCTGTTCTCCCCGGCGATGGCACGAAGTTTCCTGCGCTCGCCGCGGGCGACTGGTTCCCCGGCACGCTCATCAAGGTCGACGGCTCATCAGAGATCGTCAAGGTTACGGCGCGAGCTATCGACTCATTCACGGTCGTTCGCGCTCAGGAGGGTACGGCGGCCCTCGACTTCAACGCAGGTGATCGCTTCGAGCTCCGCATCACCGCTTTCGCCGCCCAGAACACCAGCGATATCGCGCCATCCCTGGCGAACCTGGATCGCACCGTCAATCTCCGCTCGCTGTACCAGATTTTCGACCTGCTCGAGCCGATCGGGACCGTGAAGTATTGGGACAGCGACGCGCCGCCCCCGCCCGGCTACTTCATCTGTAACGGCCAGAACGGCACGCCCGACTGGCGCGACCGCTTCATCGTCGTCGCAGGCGCCAGCTACGCGCGCGGCGCGACCGGCGGCGCGAACACCGTGACGCTCGCGCCCGAGCAGATGCCTGTCCACAATCACGGGCTGCACGATCCGGGCCACGCGCACGGCGTCGCCGATCCGGGCCACAATCACTACGTCAACGATCCGGGCCATGCGCACGGCTTCAAGGTCGTCGCATACAGCATTGACGGCGGCGGTTCGGGGCAACTCACCGGCGGCGGCTACCAGTCCCCGAACGATGGCGAATTCAACGGCGTCACGAACGGCAGCGGCACGGGCATCTGGCTCAATGGTTCGGGGACCGGCATCAGCATCTACGGCTCCGGCACCGGCATCTGGCTCGACAACGCGGGCGGCGGGCAGGCGCACGAGAACCGGCCGCCCTACGTCGCAATCCCGATCATCCGCAAGATGGTCACTGCTCTCAGCACTCTGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4243b7f00dad38d9b657dd3f83f88d122b4f9f232940cc8d6b4b616f206bbbcc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of DC1, a broad-host-range Bcep22-like podovirus Lynch,K.H., Stothard,P. and Dennis,J.J. 2012 22139000 GenBank