Protein

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Genbank accession
XII34074.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSRNISTVATYRIDGSTVEFLIPFEYLSRKFVRVTLIGRDRKELVVNRDYRYVSATQIRTTKTWQVGEGYEFIELRRHTSATERIVDFKDGSILRAQDLNISTIQALHIAEEARGLAADTLGVNDDGHLDARGRKIINVANPDSDRDAVNFSFLDEAEKSVTQTLVEVKRLKQDIDAKHTQVGRCKSVEMLRKVVPSKHGQRILVDAYYEGSTTGGGEFVADLQDLTTADDGGSCFVVLNNTARWKRIFDGRVDVVDFGAKSDGDATIAFENAFKYAGEHKKIITSDASTYFINKPLFLSGVGGIELNGKLYAKMTPENKSKPIITWAENAKTLTQSHNNFINLVMWSEPTEDAPAICLAGLKSTNLKIGETGCVQIYATTEQNEQQVDFKGVEVSSTAYNRFDIDVLSTLHITGKGQGWVNENVINAQRFRALKAGFRAGILIDGEYRHNHNLIRRGCLEGGQTINIENGSSNTIEDARFERNPQNPDELLTISFSKNAFSNRIIASWVSNPEFTNTPYGVHYGTVKVTDKGVDNVVSHIQETYSDEACLFTLSQTTPFVSTLNKATFPMKYTTDIEGVNGIKQLISGSFKLLQNYAEVYKQSQFIHVRNGTMFDLSSDAAHFRLGVELFDESKAPITTALDSHIKSGQLKVDGNKYKMDRNVSHANFTIISEQVRYVRVLITSGNDTENQVFDYLRFVVRYPKHFIEKSRGYHNIQQPIRKRSLFYRGVEDDIDMTEVGEGVVCYKQDLSEMKINLVRVALVINKIVGNVLIIEGLPVSGIKEHTQDSEQDWSLIYPHNDQERKLAVERVEFLSSEKQTKIHIQGTIPPELRAGESIVLILTKTKKLA
Physico‐chemical
properties
protein length:851 AA
molecular weight: 95543,69130 Da
isoelectric point:6,43420
aromaticity:0,08461
hydropathy:-0,37098

Domains

Domains [InterPro]
DC_0778
STR
1–510
DC_0778
IPR005604
ATT
6–132
IPR005604 Coil IPR012334
IPR011049
STR
92–189
IPR011049 IPR011050
DC_1748
RBD
489–848
DC_1748
XII34074.1
1 851
Architecture
ATT
STR
RBD
ATT 1-132 | STR 133-553 | RBD 554-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XII34074.1
1 851
Domain Start End Length (AA) Confidence
N-terminal 1 268 268 0,9954
Central domain 269 539 272 0,9833
C-terminal 540 851 311 0,9531
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-268
Central
269-539
C-terminal
540-851

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage Pmp1
[NCBI] 		3127672 Viruses >
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XII34074.1 [NCBI]
Genbank nucleotide accession
PP978974.1 [NCBI]
CDS location
range 4001 -> 6556
strand -
CDS
ATGTCATCAAGAAATATTAGTACGGTGGCGACCTATCGAATCGACGGTTCCACAGTGGAGTTTCTGATTCCCTTCGAGTATCTTAGCCGTAAATTCGTTAGGGTTACTCTGATTGGTAGAGACCGAAAGGAACTTGTGGTAAATAGGGATTACCGTTATGTATCAGCTACCCAAATCCGAACAACTAAAACTTGGCAAGTCGGTGAAGGTTATGAGTTCATTGAATTACGCCGACACACAAGCGCAACCGAACGAATCGTGGACTTCAAAGATGGTTCGATTCTTCGTGCGCAAGACCTAAATATTAGTACAATCCAAGCGTTACACATTGCGGAGGAAGCTCGAGGTCTAGCAGCCGATACCTTAGGGGTCAATGATGATGGGCATTTAGATGCTAGAGGTCGAAAGATTATAAATGTGGCTAACCCAGATTCTGACCGTGATGCTGTTAACTTTAGTTTCCTCGATGAGGCCGAGAAGTCAGTCACCCAGACCCTAGTGGAAGTTAAGCGTTTAAAACAAGATATTGACGCTAAACATACACAGGTTGGTCGTTGTAAATCAGTAGAGATGTTACGCAAAGTCGTTCCTAGTAAACATGGACAGCGTATTTTGGTGGATGCGTACTATGAAGGCAGCACAACAGGCGGTGGTGAGTTTGTGGCGGATTTGCAAGATTTAACGACAGCAGATGATGGAGGAAGTTGTTTTGTTGTGTTGAACAATACAGCACGCTGGAAACGGATATTTGATGGTCGTGTGGATGTGGTTGATTTTGGCGCAAAATCAGATGGAGACGCGACAATCGCGTTTGAAAATGCGTTTAAATATGCGGGTGAGCACAAGAAGATAATTACGTCTGATGCGTCCACTTATTTCATCAATAAGCCATTATTTCTCTCGGGTGTTGGGGGGATTGAATTAAACGGTAAGCTTTATGCGAAAATGACCCCAGAGAACAAAAGTAAACCCATTATTACTTGGGCAGAAAATGCGAAAACACTCACGCAATCGCACAACAATTTTATTAATTTGGTCATGTGGTCAGAGCCGACAGAGGATGCTCCCGCGATATGCTTAGCGGGTTTAAAATCGACCAATTTAAAGATTGGAGAAACGGGCTGTGTTCAGATTTACGCAACAACAGAGCAAAATGAGCAACAAGTTGATTTTAAAGGCGTGGAGGTTTCTTCAACGGCTTATAATCGATTTGATATTGATGTGTTATCTACTTTACACATTACAGGCAAAGGGCAGGGTTGGGTAAATGAAAATGTCATTAATGCACAACGCTTTAGAGCATTAAAAGCGGGCTTCCGGGCAGGTATACTCATTGATGGTGAGTATCGCCATAATCATAATTTAATTAGACGAGGTTGTTTGGAGGGAGGGCAAACGATAAATATTGAAAATGGCTCAAGCAACACAATTGAGGATGCGCGTTTTGAGCGTAATCCGCAAAATCCGGATGAGTTATTAACGATTTCGTTTTCGAAAAACGCCTTTTCAAACAGAATCATTGCGAGCTGGGTATCAAATCCAGAATTCACAAATACCCCCTACGGTGTGCATTACGGTACGGTGAAGGTGACGGATAAGGGAGTAGACAATGTTGTGAGTCATATACAAGAAACTTATTCAGATGAAGCGTGTTTATTTACCTTGTCACAGACGACACCTTTTGTCTCAACGCTCAATAAAGCGACCTTTCCCATGAAATACACAACCGATATTGAAGGGGTGAATGGTATTAAGCAGCTTATTAGTGGTAGTTTTAAACTGTTGCAAAATTACGCTGAAGTCTATAAACAAAGCCAATTCATACACGTAAGAAACGGAACGATGTTTGATTTAAGTTCAGATGCAGCGCACTTCCGCTTAGGAGTGGAATTGTTTGATGAAAGCAAAGCACCGATTACTACAGCGTTAGATAGTCATATAAAATCAGGACAACTCAAAGTCGATGGAAACAAATACAAGATGGACCGCAATGTGAGTCATGCTAATTTTACGATTATCTCTGAGCAGGTGCGCTATGTAAGGGTGTTAATCACTTCAGGAAATGATACGGAAAACCAAGTTTTTGATTATTTACGTTTTGTGGTGCGCTATCCGAAGCACTTTATTGAAAAATCGAGAGGATATCATAATATTCAACAGCCGATTAGAAAGCGAAGCTTGTTTTATAGAGGCGTTGAAGATGATATTGATATGACGGAAGTGGGAGAAGGTGTAGTGTGCTATAAACAAGATTTAAGTGAAATGAAAATTAACTTAGTCCGTGTTGCTTTAGTGATTAACAAGATAGTCGGGAATGTGTTAATCATTGAGGGTCTTCCTGTTTCAGGGATAAAAGAGCACACACAAGATAGCGAGCAAGATTGGAGCTTGATTTATCCGCACAATGACCAAGAGCGTAAGCTTGCGGTGGAGAGAGTGGAGTTTTTGTCGAGTGAAAAACAAACCAAAATTCACATACAAGGTACTATACCGCCGGAGCTTAGGGCGGGGGAGAGCATCGTGTTGATTTTAACAAAGACAAAGAAGTTAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
01b360ae3e695cb2ac79f0c3cc574ddc525b2c328d4267820773503bc8ceb504
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6642
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50