Protein

View in Explore
Genbank accession
URP75146.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSYTFTEHIANGTQVTYPFSFAGRDKGYLRASDVIVESLQGNTWIEVTSGWQLTGTHQITFDVAPVAGLKFRIRREVQKEYPYAEFDRGVTLDMKSLNGSFIHILEITQELLDGFYPEGYFIKQNVSWGGNKITDLADGTNPGDAVNKGQLDAIDKKHTDWNAKQDIEIADLKAGMTSGIAHRTVPWYTIAQGGEISVKPPYEFQDALVFLNGILQHQIVGAYSISNNTITFAEPLVAGTEVYVLIGSRVATSEPNIQLELNFDLVEGQQVVQIGSAFKYIEVYLDGLLQPKLAYQVDGDIVTFSERVPECRMTAKIITA
Physico‐chemical
properties
protein length:320 AA
molecular weight: 35529,68350 Da
isoelectric point:4,84492
aromaticity:0,10625
hydropathy:-0,13344

Domains

Domains [InterPro]
DC_0041
STR
1–310
DC_0041
IPR011049
STR
128–154
IPR011049
G3DSA:6.10.250.2040
STR
133–185
G3DSA:6.10.250.2040
URP75146.1
1 320
Architecture
STR
STR 1-310 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EEc4
[NCBI] 		2950298 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URP75146.1 [NCBI]
Genbank nucleotide accession
ON210145.1 [NCBI]
CDS location
range 34696 -> 35658
strand +
CDS
ATGAGTTATACTTTCACAGAACATATAGCCAACGGTACGCAAGTAACCTATCCCTTTAGCTTTGCTGGTAGGGATAAAGGTTATCTTCGTGCCTCAGATGTGATAGTGGAGTCTCTTCAAGGTAACACTTGGATTGAGGTTACATCTGGCTGGCAACTAACTGGCACGCACCAGATTACTTTTGATGTAGCACCAGTTGCAGGTTTGAAGTTCCGTATTCGAAGGGAAGTACAAAAGGAGTATCCATACGCTGAGTTTGACCGTGGTGTTACCTTGGATATGAAGTCTTTAAATGGTTCTTTCATTCATATACTGGAGATTACACAGGAGTTACTTGACGGGTTTTATCCAGAAGGATACTTCATTAAACAGAATGTAAGCTGGGGTGGCAATAAGATTACTGATTTGGCTGATGGCACAAATCCTGGAGATGCAGTAAATAAAGGGCAGCTTGATGCCATCGACAAGAAGCATACAGATTGGAACGCCAAACAGGACATTGAGATTGCTGACCTTAAGGCTGGTATGACTTCTGGTATTGCGCACAGAACTGTTCCTTGGTACACGATAGCCCAAGGTGGTGAGATTTCCGTAAAACCACCTTATGAATTTCAAGATGCACTAGTTTTCCTTAATGGGATATTGCAGCACCAAATTGTAGGCGCATACTCTATAAGCAACAACACTATCACTTTCGCAGAGCCGCTTGTGGCGGGTACAGAGGTGTATGTGCTGATTGGTAGTCGTGTGGCTACATCTGAACCTAATATTCAGTTGGAGTTGAACTTTGACTTAGTAGAAGGCCAACAAGTAGTACAGATTGGCTCTGCATTTAAGTACATTGAGGTCTACCTTGATGGATTATTACAACCTAAACTTGCTTATCAGGTAGACGGTGACATTGTTACTTTCTCAGAAAGAGTACCAGAATGCCGGATGACTGCTAAGATTATCACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d3b2cfe25d5551b78517aba70f4aa8d7ded89188ea89512fb44498c1206b1b45
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8558
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Report on the Use of Tailored Phage Cocktails for 12 Distinct and Challenging Patient Cases Green,S., Clark,J., Hernandez-Santos,H., Weesner,K., Aslam,S., Campbell,W., Doernberg,S., Blodget,E., Morris,M., Suh,G., Obeid,K., Bocchini,C., Silveira,F., Filippov,A., Whiteson,K., Terwilliger,A. and Maresso,A. 1920-06 — GenBank