Protein

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Genbank accession
WYV99536.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPNIVKPSGINLLWAAGGTKVDPGQAKTNIGWVVELPPYQYQNWLDNRQDTFIAHINQHGIAEWDAETEYQGGLSYTQGSDGKIYKCTQTNTNRNPTNPVNNIYWVVAFESFGAVAVVQTALNTHIANYQTLTGLSNTTVARNNLGVYSKAESDTRFAAVIGSSANRFSVANATLPSHAVPLGQLNSLLGTASPATETVTGVLAIATVGETELGAIDNKAVTPAKAKAVYVKKSQNLADIPNKATARTNLGLSDSATLPSSTWIRASNNLSDLQSATIARNNLGLGTASTYAVGDFLRSVNNLADVPNKASARANLGLTSVATSNPAGYLYKAENLAGLTSAATARANLGLSDSATLPSDTWMRGGNNLSEVSNVQAARNNLGLGNLSTRNVFGVVADLDFTASANGDFGYQKLPTGIIMQWGVVSLGGGSNEQSVTFNIPFPNFCGNIQLTNTENSPNEGNTVRVRSKTNTNFVLANGGGNSFTAYMWFAIGY
Physico‐chemical
properties
protein length:494 AA
molecular weight: 52089,26560 Da
isoelectric point:7,70188
aromaticity:0,07895
hydropathy:-0,18239

Domains

Domains [InterPro]
DC_2128
STR
2–281
DC_2128 DC_1977 DC_1655 IPR054075
DC_1977
STR
323–365
DC_1977 G3DSA:2.60.40.3940
WYV99536.1
1 494
Architecture
STR
STR
RBD
STR 2-281 | STR 292-410 | RBD 411-494
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuM-Kassivere
[NCBI] 		3132620 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYV99536.1 [NCBI]
Genbank nucleotide accession
PP496416.1 [NCBI]
CDS location
range 22302 -> 23786
strand +
CDS
ATGCCTAACATTGTAAAACCATCCGGCATCAACCTGTTGTGGGCTGCTGGTGGTACTAAGGTTGATCCGGGGCAAGCCAAGACGAATATTGGGTGGGTTGTTGAACTTCCACCATATCAGTACCAAAACTGGCTTGACAACAGACAAGACACTTTCATTGCACACATCAACCAACATGGTATTGCTGAGTGGGATGCTGAAACTGAATACCAAGGTGGACTAAGCTACACACAAGGTTCAGACGGTAAAATCTACAAGTGTACACAAACTAACACAAACAGAAACCCAACCAACCCAGTGAACAACATTTATTGGGTCGTTGCTTTTGAATCCTTTGGTGCAGTGGCTGTTGTTCAGACAGCTTTGAACACTCACATCGCAAACTACCAAACACTTACTGGCCTGTCAAACACGACTGTTGCACGTAACAACCTTGGTGTATACTCTAAGGCTGAAAGTGACACTAGGTTTGCTGCTGTAATTGGTAGTTCGGCTAATAGATTCTCTGTAGCCAATGCGACACTACCAAGTCATGCTGTTCCACTCGGACAACTTAACTCCCTGCTTGGCACTGCAAGCCCTGCTACAGAAACTGTTACGGGAGTTCTTGCTATTGCAACTGTTGGAGAGACTGAACTTGGAGCTATTGATAACAAAGCCGTTACACCTGCGAAGGCTAAGGCTGTGTATGTCAAGAAATCACAAAACTTGGCCGACATTCCTAACAAAGCCACAGCTCGTACAAACCTAGGACTCTCGGATTCAGCCACCCTGCCTTCTAGCACTTGGATCAGGGCGAGCAATAACCTGTCTGATCTACAAAGCGCGACAATTGCAAGGAATAACCTTGGACTTGGTACAGCCTCAACTTATGCTGTTGGTGACTTCCTAAGGTCTGTTAACAACCTAGCAGATGTTCCTAACAAAGCGTCTGCAAGGGCCAACCTAGGGCTTACATCAGTAGCCACTTCTAACCCAGCTGGTTACCTGTACAAAGCAGAAAACTTGGCAGGTTTGACAAGCGCTGCGACGGCTCGTGCCAACCTCGGATTGTCTGACTCTGCAACACTCCCATCAGATACTTGGATGCGTGGTGGAAACAACCTGTCAGAAGTTTCGAACGTACAAGCTGCACGTAACAACCTTGGACTTGGTAACTTGTCTACACGGAATGTGTTTGGGGTTGTAGCTGACCTTGACTTCACTGCCTCAGCTAACGGAGATTTCGGATACCAGAAACTCCCAACGGGCATTATCATGCAGTGGGGTGTTGTAAGCCTTGGAGGTGGGAGCAATGAACAGTCAGTGACATTTAATATCCCATTCCCTAACTTCTGTGGAAACATCCAGCTAACCAACACTGAGAACTCTCCTAATGAGGGGAACACTGTCCGTGTAAGGTCTAAGACAAATACAAACTTCGTACTGGCGAACGGTGGTGGGAACAGCTTCACAGCTTATATGTGGTTTGCTATTGGCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f7261217adba30f88e3baaea7299dd4b9ef56d4ab9617118fff16eb7e3d78840
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7587
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank