Protein

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Genbank accession
CAB4134417.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTLTKVSYSMIKGQYVNALDYGADPTGATDSYDALKAAIDAAQGRVVYVPAGTYKVTNTLAYDASATFGFTSPGLKIVGDGMTKTFFDHQAANKPLFRLDSGTHGGTYTAAMGAVLSEFAITNTYATSGTVGIEVLNAYEVKMDHLYIKGMTSHGIELKNGAYADDGWNMVSIKQTWIDTCAGWGIKADGTAGRNEGSYTYLEQVFFQTCGTASASTPPPSGGMIWKGQILTMEQVAFANGNENVGLFIKGESGAGQTVDLRSTTFENCKKRGFYATGINVFKGRNLQFYNNDTYTATAQCEFIGDSYLINQIDIDGVTIRATSANNACTAFKLSGANVNFDTCRVRNVNWENFDFAGQVRFNGWQFDQVQNCGAIVVASSSEVYFKPSARNPFGKTVPLRLVGPQNQTGVGVASTTGEWIAHQITTSGLFLNITSVVANTRYYVYLYDNNGAAALAYSTTNWIVGDFGYAVKSDNQAWLYVGSFEAGATNGTAKTTAGGWLNPSLVPNTQVGAGRYMWFDSSNVLRSNASLPANDTDGAAV
Physico‐chemical
properties
protein length:542 AA
molecular weight: 58115,04560 Da
isoelectric point:5,48857
aromaticity:0,11993
hydropathy:-0,15314

Domains

Domains [InterPro]
IPR012334
STR
5–392
IPR012334
IPR011050
STR
13–372
IPR011050
IPR024535
ENZ
15–213
IPR024535
CAB4134417.1
1 542
Architecture
STR
STR 5-392 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4134417.1
1 542
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,8874
Central domain 28 396 370 0,9856
C-terminal 397 542 145 0,9874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-396
C-terminal
397-542

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4134417.1 [NCBI]
Genbank nucleotide accession
LR796279 [NCBI]
CDS location
range 30936 -> 32564
strand -
CDS
ATGACTTTGACAAAAGTTTCTTATTCAATGATCAAGGGGCAGTATGTCAATGCCTTGGATTACGGTGCTGACCCAACTGGAGCAACAGACAGTTACGATGCACTGAAAGCCGCTATTGATGCCGCCCAAGGACGAGTTGTTTATGTGCCCGCAGGGACTTACAAAGTCACTAACACTTTGGCTTATGATGCCTCCGCAACTTTTGGTTTCACATCACCAGGTTTAAAGATCGTTGGCGATGGCATGACAAAGACATTCTTTGACCACCAAGCTGCCAACAAGCCTTTGTTTAGATTGGATAGCGGTACACATGGCGGAACATACACCGCAGCAATGGGTGCGGTTTTGTCTGAGTTTGCGATCACTAACACATACGCAACTTCTGGCACTGTGGGCATTGAAGTTCTTAATGCTTACGAAGTCAAGATGGATCACCTTTACATCAAGGGCATGACATCCCACGGCATTGAGTTAAAAAATGGCGCTTACGCAGATGATGGGTGGAACATGGTTTCCATCAAGCAAACTTGGATTGACACTTGTGCTGGTTGGGGCATCAAAGCTGATGGCACAGCAGGTCGAAATGAAGGTTCTTACACATATTTGGAACAAGTGTTTTTCCAAACTTGTGGAACTGCAAGCGCAAGCACCCCACCACCATCGGGCGGCATGATCTGGAAAGGCCAGATTTTGACAATGGAGCAAGTTGCTTTTGCGAACGGCAACGAAAACGTGGGTTTGTTCATCAAAGGTGAATCCGGGGCTGGTCAGACAGTTGACCTTCGCAGCACCACATTTGAAAACTGCAAAAAACGTGGTTTTTACGCTACTGGCATAAATGTGTTCAAAGGTCGCAATCTTCAGTTCTACAACAATGACACATATACAGCAACGGCTCAATGTGAATTTATTGGTGACTCTTACTTAATCAATCAAATTGACATTGATGGAGTAACCATTCGAGCAACATCAGCAAATAATGCTTGCACAGCTTTTAAATTAAGCGGTGCTAATGTCAACTTTGATACTTGCCGTGTTCGCAACGTCAATTGGGAAAACTTTGACTTTGCTGGTCAAGTTCGCTTTAACGGTTGGCAGTTTGATCAAGTTCAAAATTGCGGCGCAATAGTGGTCGCCAGTTCTTCTGAAGTGTATTTCAAACCTAGTGCAAGAAATCCATTTGGTAAAACTGTACCCCTACGTCTGGTTGGCCCACAAAATCAAACGGGTGTTGGCGTTGCTTCAACAACTGGCGAGTGGATTGCCCATCAAATAACAACCAGTGGATTGTTTTTAAACATAACTAGCGTTGTTGCCAACACCAGATACTATGTTTATTTATATGACAACAATGGGGCAGCAGCACTGGCATACTCAACAACCAATTGGATTGTTGGTGATTTTGGGTATGCTGTTAAATCTGATAATCAGGCTTGGTTGTATGTTGGAAGTTTTGAAGCTGGCGCAACTAACGGAACCGCAAAGACGACTGCTGGAGGCTGGTTAAATCCCAGTCTTGTACCGAATACACAAGTCGGGGCTGGTCGTTATATGTGGTTTGATAGCTCTAATGTGTTACGCAGCAATGCCTCGTTGCCAGCAAACGACACTGACGGCGCAGCAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d64e2e6e3f67064ea9fbd68dc06bce7be4864a11739b53aec1c8fe67e20df9e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7216
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50