Protein

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Genbank accession
AHI61252.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSYGLKINFDGYPDIDISSGWYPPVYLGYVDFVTRSDKTPTSVTMANVPSGAKLYAYADTQTSKTNGGSGSNLDMYSVRCWVEGNTVNVAMATWRYISSSSPNLGKTIRFYIFATLPPSSISGYGLAVMNDPAGINAAINQDSSVAALVFKFTDRSIGAGKSKTYNTGLSTSSPAPVVFVSDSGYNCLSTYVFSSGGTWHISLYRTGGYWNTDWTSNNWLNETTPRSGVVRLAAFAKNPDPVSGYGMALYNRRGECIMHTSRPPLITRRTLTNPTPTVPGNPPSANKMGEAAGDKLSAQDMSNHPMLIGRDLGISVIENEALPTSVWLQQDGTWTSGTLSRVNTAPSVTITRFGWFGTTGDDLGQPFIYGTDYFDDY
Physico‐chemical
properties
protein length:377 AA
molecular weight: 40809,05440 Da
isoelectric point:6,30034
aromaticity:0,11671
hydropathy:-0,26976

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHI61252.1
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,9427
Central domain 16 214 200 0,0048
C-terminal 215 377 162 0,9911
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-214
C-terminal
215-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage SHOU24
[NCBI] 		1414739 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHI61252.1 [NCBI]
Genbank nucleotide accession
KF623293 [NCBI]
CDS location
range 42768 -> 43901
strand -
CDS
ATGAGTTACGGACTTAAAATAAACTTTGACGGATACCCTGACATAGACATATCTTCTGGCTGGTACCCTCCTGTGTATTTAGGGTACGTTGATTTTGTTACTAGATCTGACAAAACCCCTACCTCGGTAACTATGGCTAATGTTCCTTCTGGGGCAAAACTGTACGCGTATGCAGATACACAAACTTCTAAAACAAACGGAGGAAGCGGATCAAACCTAGACATGTACAGCGTTCGTTGCTGGGTAGAAGGGAATACAGTAAACGTGGCTATGGCTACTTGGCGATACATCTCTTCATCTAGCCCTAATCTTGGTAAAACGATCAGGTTCTATATATTTGCTACCCTCCCTCCATCCTCTATAAGTGGTTACGGCCTGGCCGTGATGAATGACCCTGCTGGCATTAACGCAGCCATTAACCAAGACTCTAGTGTCGCAGCTCTGGTGTTCAAGTTCACAGACAGGTCGATCGGAGCCGGAAAATCTAAAACGTATAACACAGGCTTATCTACTTCGAGCCCGGCTCCTGTTGTTTTTGTGTCTGATAGTGGCTACAACTGTCTATCTACTTATGTGTTCTCAAGCGGAGGGACGTGGCATATAAGTCTTTACCGTACTGGCGGGTACTGGAATACAGACTGGACTTCTAACAATTGGCTAAATGAGACTACTCCTAGATCAGGAGTGGTTAGATTAGCTGCATTCGCTAAAAATCCTGACCCTGTGTCAGGCTACGGTATGGCGTTATACAACCGAAGAGGAGAGTGCATAATGCACACTTCAAGGCCTCCGTTGATAACTAGACGTACACTAACAAACCCAACTCCAACAGTGCCAGGTAATCCGCCTTCAGCTAATAAAATGGGAGAAGCCGCCGGGGACAAGCTTAGCGCTCAGGACATGTCAAACCACCCTATGTTGATAGGAAGAGACCTCGGCATATCCGTCATAGAGAACGAAGCACTGCCTACTTCTGTATGGCTGCAACAAGACGGTACGTGGACTTCTGGCACATTATCAAGAGTAAATACTGCACCTTCTGTAACCATCACAAGGTTTGGGTGGTTTGGAACTACCGGAGATGACCTAGGTCAACCGTTTATATACGGCACAGATTACTTTGACGACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f6933bb4c6026b493dd90028cd50cb80be74c5188fd409a704b013f7463d12d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6305
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50