Protein

Genbank accession
AMO43478.1 [GenBank]
Protein name
putative pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTLRVDTLQKPDNSVTVNLEDIITEVNLGDTTSPTKGAGLVGFSSSVSYPDGTIGAEILEVSSKIGVTVKDYGAVGDGVTDDTVAIQAAITAVGQYKDLGWPRGTYLITQKLVMPTGQRWIGSGGQRGATIKKGANIDMVEVGTLCTVLDISLEGEGATYSGKGFVIASGFSQNLVRCRAVNMGGEPLYFANNAGGGANVTAFEGYPVDTDTYAGCVIAGDTSPHPRFFRGMWLSGANFALGPGAGNGGSMTQFYIRDLRFDPTSTLFHISNGRCATLGATTTLKGFDHSIDGVAFAGPVALDSAQGINLGPSCSVPSLTENATNSQYNSVYVQRRTYTPTWTQTSATPAIGNGTLTGNYVRAGHMCHVQIELVAGSTTTFGDAASGYRFSLPFPGHLSFNQRGFPVRIYDTSASADFTGWASIGAGQDYITISVGAQQVRSTSPMTWATGDTLHCSFSYMTR
Physico‐chemical
properties
protein length:464 AA
molecular weight: 48680,78270 Da
isoelectric point:5,49897
aromaticity:0,09267
hydropathy:-0,06444

Domains

Domains [InterPro]
IPR012334
57–389
IPR012334
IPR011050
67–319
IPR011050
IPR024535
69–143
IPR024535
AMO43478.1
1 464
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage O4
[NCBI] 		1784982 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMO43478.1 [NCBI]
Genbank nucleotide accession
KU535860 [NCBI]
CDS location
range 1352 -> 2746
strand +
CDS
ATGAGTACGTTGAGAGTAGACACTCTACAAAAACCTGATAACAGCGTCACTGTTAATCTGGAAGATATCATTACGGAAGTGAATCTAGGTGATACCACTTCCCCCACTAAAGGAGCTGGCCTAGTAGGTTTCTCTAGTAGCGTTAGCTATCCTGATGGTACTATAGGGGCTGAAATCCTAGAGGTAAGCTCTAAGATTGGCGTTACAGTAAAAGACTATGGTGCTGTTGGTGATGGCGTCACTGATGATACTGTAGCAATTCAAGCAGCCATCACTGCGGTTGGACAATATAAAGACTTAGGTTGGCCTCGTGGTACCTACCTAATTACTCAGAAGTTGGTAATGCCAACTGGCCAAAGATGGATAGGTTCTGGTGGCCAACGTGGTGCCACTATCAAGAAGGGCGCCAACATCGACATGGTAGAAGTAGGTACTCTGTGTACTGTTCTTGATATTAGTCTAGAAGGTGAGGGAGCTACTTACTCCGGTAAAGGGTTTGTAATTGCGTCTGGCTTCAGTCAGAACCTAGTGCGTTGCAGAGCCGTTAACATGGGTGGTGAACCGCTATACTTCGCTAATAACGCAGGTGGCGGTGCAAACGTAACAGCGTTTGAAGGTTACCCTGTAGATACGGATACTTACGCTGGGTGCGTTATTGCAGGAGATACTTCTCCTCATCCTCGGTTCTTCCGTGGTATGTGGTTGAGCGGTGCTAACTTTGCCCTTGGCCCTGGTGCAGGTAATGGCGGATCGATGACTCAATTCTACATTAGGGATTTGAGGTTTGATCCTACTTCAACTCTGTTCCACATTTCCAATGGACGTTGTGCAACTCTTGGAGCCACGACGACTCTTAAGGGTTTCGATCACTCAATTGATGGCGTTGCTTTTGCAGGTCCAGTTGCACTCGATTCTGCTCAAGGCATTAACCTTGGTCCGTCTTGCTCTGTACCGTCACTCACGGAGAATGCGACTAACTCGCAATACAACTCCGTCTATGTACAGCGTAGAACCTACACTCCAACTTGGACGCAGACTAGTGCTACTCCTGCAATTGGCAATGGTACCTTAACTGGTAACTATGTCCGAGCTGGCCATATGTGTCATGTGCAGATTGAATTGGTAGCAGGTTCGACTACGACCTTCGGTGATGCTGCATCAGGCTATCGTTTCTCTCTGCCGTTCCCTGGCCACCTGTCTTTCAACCAGAGGGGATTCCCTGTGCGAATCTACGACACTAGTGCTAGTGCAGATTTCACTGGGTGGGCATCCATTGGTGCGGGCCAAGATTACATCACCATCTCTGTGGGAGCACAGCAGGTTCGTTCTACGTCACCTATGACTTGGGCCACTGGGGATACGCTGCATTGCTCGTTCTCCTATATGACCCGCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f150b65cf0492aa1318511b3ca47027628f3337ba51c5dcdb157ddc3ba309b89
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8400
Evidence 0,8400
Download PDB

Literature

Title Authors Date PMID Source
Genome analysis of a novel Pseudomonas aeruginosa phage O4 and identification of its receptor Zhang,F., Pan,X. and Yang,H. 2022-06-18 — GenBank