Protein

View in Explore
Genbank accession
APD19731.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIRPKLNRVWTSSSATLRRDPGDAKYLQGWISEIPTFQVLNYLQWKVDTTILAIAERGAAEWGTDVQYVKGSIAWDELDGTIYVATVAAPSRTLPPSQNSAHWTRSSIQISREEYVNIAAAIAAHIADTTGNPHHLTADRLGAYNKAEIDALVTTYHNLVLSHANDTNNPHQLTALLIGAVPTTGGTYTGDVQFNTNVFFDAGKTTKISNGSGLFLQNGNNLVGIDSSGNAVAGDTTTTSKLVDELSFPVLKATNEADYATPSPTFQMPLASDINIVLGSGLVDSGAWEPNFSMLDRLTATNGQNTYGFGSANNVADPTKPTTIAIDVMSNTQRVPTDVAASVRIGVTSIGISFSGGSVISAETAGQTSPTHQVTGPINTWYRVVCVWEGTFVRIYLNGAYVSGRAIAAQTATDGKLQFSILGRQPADARVWGFRNLRIWNEALSAKQVSTL
Physico‐chemical
properties
protein length:453 AA
molecular weight: 48469,54920 Da
isoelectric point:5,76111
aromaticity:0,08168
hydropathy:-0,11788

Domains

Domains [InterPro]
DC_0782
STR
5–450
DC_0782
G3DSA:2.60.120.200
STR
281–453
G3DSA:2.60.120.200
IPR013320
STR
303–453
IPR013320
PF13385
LEC
320–451
PF13385
APD19731.1
1 453
Architecture
STR
STR 5-453
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP101
[NCBI] 		1916414 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD19731.1 [NCBI]
Genbank nucleotide accession
KY087898.2 [NCBI]
CDS location
range 48886 -> 50247
strand +
CDS
ATGGCTATACGCCCAAAATTAAACAGAGTCTGGACAAGTTCGAGCGCAACTCTTCGACGTGACCCAGGCGATGCAAAATATCTACAAGGTTGGATTTCAGAAATCCCTACCTTCCAAGTTCTAAACTACTTGCAGTGGAAAGTTGACACCACAATTTTAGCAATTGCTGAACGTGGTGCTGCGGAGTGGGGAACTGACGTCCAATATGTAAAAGGCTCAATTGCTTGGGATGAGCTGGATGGGACAATTTACGTTGCGACTGTTGCTGCACCAAGCAGAACACTCCCACCATCTCAGAACAGTGCACACTGGACAAGAAGCTCAATCCAGATTTCTCGTGAAGAGTATGTAAATATTGCTGCTGCTATTGCTGCACATATTGCAGACACCACAGGAAATCCACATCACCTAACTGCTGACCGTCTTGGTGCATATAACAAAGCTGAGATTGATGCGCTGGTTACGACATATCATAATCTTGTTCTGTCTCATGCCAATGACACAAACAATCCGCATCAGTTAACTGCCCTCTTGATTGGTGCTGTACCAACAACTGGTGGAACGTATACAGGTGATGTGCAGTTCAACACAAACGTTTTCTTTGATGCAGGGAAGACAACCAAGATATCCAATGGGAGTGGGTTGTTCTTGCAGAATGGGAACAATTTGGTTGGTATTGATTCCTCCGGCAATGCTGTTGCAGGAGACACCACAACCACATCAAAGCTTGTTGACGAACTATCATTTCCAGTTTTAAAGGCAACAAATGAAGCTGACTATGCAACTCCATCACCAACGTTCCAGATGCCTTTGGCGTCTGACATAAACATCGTACTGGGTTCTGGCTTAGTTGACAGTGGGGCTTGGGAACCAAACTTCTCAATGCTTGACAGATTGACTGCAACAAACGGGCAGAACACATACGGCTTTGGTTCAGCCAACAATGTTGCAGACCCGACAAAGCCAACAACAATTGCCATTGATGTAATGTCTAACACTCAACGTGTCCCAACAGACGTAGCTGCTTCTGTTCGCATTGGGGTTACCTCAATTGGTATTTCATTTAGCGGCGGCAGTGTAATCAGTGCTGAGACTGCTGGGCAAACTTCACCAACACATCAGGTAACAGGGCCAATCAATACTTGGTACCGTGTTGTCTGTGTGTGGGAAGGTACGTTTGTCCGTATCTATCTCAACGGTGCTTATGTATCCGGTCGGGCAATTGCTGCACAAACAGCAACAGACGGCAAGTTGCAGTTCTCAATTCTTGGGAGACAGCCTGCCGATGCTCGTGTGTGGGGTTTCCGGAATCTTCGAATCTGGAATGAAGCACTGTCTGCCAAACAAGTTTCAACACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac515f08e288060888af58798ed95bbad36fa7dea0b5aac7a5237032ec1b8e82
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50